Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0751 and Dsui_0752 are separated by 212 nucleotides Dsui_0752 and Dsui_0753 are separated by 130 nucleotides Dsui_0753 and Dsui_0754 are separated by 130 nucleotides Dsui_0754 and Dsui_0755 are separated by 133 nucleotides
Dsui_0751: Dsui_0751 - Eco57I restriction endonuclease, at 750,518 to 751,729
_0751
Dsui_0752: Dsui_0752 - hypothetical protein, at 751,942 to 752,103
_0752
Dsui_0753: Dsui_0753 - ATPase component of ABC transporters with duplicated ATPase domain, at 752,234 to 753,850
_0753
Dsui_0754: Dsui_0754 - hypothetical protein, at 753,981 to 754,355
_0754
Dsui_0755: Dsui_0755 - hypothetical protein, at 754,489 to 755,103
_0755
Position (kb) 752
753
754 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 751.317 kb on - strand, within Dsui_0751 at 751.398 kb on - strand, within Dsui_0751 at 751.458 kb on + strand, within Dsui_0751 at 751.458 kb on + strand, within Dsui_0751 at 751.466 kb on - strand, within Dsui_0751 at 751.466 kb on - strand, within Dsui_0751 at 751.466 kb on - strand, within Dsui_0751 at 751.509 kb on - strand, within Dsui_0751 at 751.514 kb on - strand, within Dsui_0751 at 751.624 kb on - strand at 751.666 kb on - strand at 751.717 kb on - strand at 751.743 kb on + strand at 751.745 kb on - strand at 751.745 kb on - strand at 751.745 kb on - strand at 751.778 kb on + strand at 751.778 kb on + strand at 751.783 kb on + strand at 751.785 kb on - strand at 751.821 kb on + strand at 751.821 kb on + strand at 751.829 kb on - strand at 751.876 kb on + strand at 751.876 kb on + strand at 751.876 kb on + strand at 751.876 kb on + strand at 751.876 kb on + strand at 751.876 kb on + strand at 751.876 kb on + strand at 751.876 kb on + strand at 751.884 kb on - strand at 751.884 kb on - strand at 751.884 kb on - strand at 751.884 kb on - strand at 751.884 kb on - strand at 751.884 kb on - strand at 751.894 kb on - strand at 751.914 kb on + strand at 751.914 kb on + strand at 751.914 kb on + strand at 751.933 kb on + strand at 751.978 kb on + strand, within Dsui_0752 at 752.028 kb on + strand, within Dsui_0752 at 752.035 kb on + strand, within Dsui_0752 at 752.036 kb on - strand, within Dsui_0752 at 752.036 kb on - strand at 752.036 kb on - strand, within Dsui_0752 at 752.040 kb on + strand, within Dsui_0752 at 752.048 kb on - strand, within Dsui_0752 at 752.059 kb on + strand, within Dsui_0752 at 752.271 kb on - strand at 752.329 kb on + strand at 752.419 kb on + strand, within Dsui_0753 at 752.438 kb on - strand, within Dsui_0753 at 752.571 kb on + strand, within Dsui_0753 at 752.680 kb on + strand, within Dsui_0753 at 752.684 kb on + strand, within Dsui_0753 at 752.731 kb on + strand, within Dsui_0753 at 752.734 kb on - strand at 752.867 kb on - strand at 752.892 kb on - strand, within Dsui_0753 at 752.969 kb on - strand, within Dsui_0753 at 753.012 kb on - strand, within Dsui_0753 at 753.132 kb on + strand, within Dsui_0753 at 753.211 kb on + strand, within Dsui_0753 at 753.259 kb on - strand, within Dsui_0753 at 753.385 kb on + strand, within Dsui_0753 at 753.559 kb on - strand, within Dsui_0753 at 753.559 kb on - strand, within Dsui_0753 at 753.693 kb on - strand at 753.703 kb on - strand at 753.704 kb on - strand at 753.714 kb on - strand at 753.727 kb on - strand at 754.005 kb on - strand at 754.016 kb on + strand at 754.030 kb on + strand, within Dsui_0754 at 754.030 kb on + strand, within Dsui_0754 at 754.036 kb on + strand, within Dsui_0754 at 754.084 kb on + strand, within Dsui_0754 at 754.084 kb on + strand, within Dsui_0754 at 754.085 kb on - strand at 754.100 kb on - strand, within Dsui_0754 at 754.100 kb on - strand, within Dsui_0754 at 754.122 kb on - strand, within Dsui_0754 at 754.185 kb on - strand, within Dsui_0754 at 754.226 kb on + strand, within Dsui_0754 at 754.272 kb on + strand, within Dsui_0754 at 754.346 kb on + strand at 754.365 kb on - strand at 754.421 kb on + strand at 754.438 kb on - strand at 754.458 kb on - strand at 754.492 kb on + strand at 754.493 kb on - strand at 754.500 kb on - strand at 754.500 kb on - strand at 754.549 kb on + strand at 754.549 kb on + strand at 754.583 kb on + strand, within Dsui_0755 at 754.583 kb on + strand, within Dsui_0755 at 754.589 kb on - strand, within Dsui_0755 at 754.589 kb on - strand, within Dsui_0755 at 754.591 kb on - strand, within Dsui_0755 at 754.591 kb on - strand, within Dsui_0755 at 754.602 kb on - strand, within Dsui_0755 at 754.638 kb on + strand, within Dsui_0755 at 754.648 kb on + strand, within Dsui_0755 at 754.655 kb on + strand, within Dsui_0755 at 754.655 kb on + strand, within Dsui_0755 at 754.663 kb on - strand, within Dsui_0755 at 754.781 kb on + strand, within Dsui_0755 at 754.789 kb on - strand, within Dsui_0755 at 754.832 kb on + strand, within Dsui_0755 at 754.832 kb on + strand, within Dsui_0755 at 754.840 kb on - strand, within Dsui_0755 at 754.840 kb on - strand, within Dsui_0755
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 751,317 - Dsui_0751 0.66 +0.6 751,398 - Dsui_0751 0.73 -0.0 751,458 + Dsui_0751 0.78 -2.1 751,458 + Dsui_0751 0.78 -1.1 751,466 - Dsui_0751 0.78 -0.3 751,466 - Dsui_0751 0.78 +0.4 751,466 - Dsui_0751 0.78 -0.2 751,509 - Dsui_0751 0.82 +0.4 751,514 - Dsui_0751 0.82 +0.1 751,624 - +0.5 751,666 - +0.4 751,717 - +0.6 751,743 + -2.9 751,745 - -0.6 751,745 - -0.4 751,745 - -0.3 751,778 + +0.4 751,778 + -1.9 751,783 + -0.8 751,785 - -0.6 751,821 + +0.7 751,821 + +0.8 751,829 - -0.6 751,876 + +1.1 751,876 + +0.3 751,876 + +0.2 751,876 + +0.7 751,876 + +0.3 751,876 + +0.1 751,876 + +0.3 751,876 + +0.2 751,884 - -1.1 751,884 - +0.4 751,884 - +0.4 751,884 - +0.4 751,884 - -1.1 751,884 - -0.6 751,894 - +0.4 751,914 + +0.3 751,914 + +0.2 751,914 + -1.1 751,933 + +0.1 751,978 + Dsui_0752 0.22 +0.4 752,028 + Dsui_0752 0.53 +0.3 752,035 + Dsui_0752 0.57 +0.3 752,036 - Dsui_0752 0.58 -0.6 752,036 - -0.6 752,036 - Dsui_0752 0.58 +0.4 752,040 + Dsui_0752 0.60 +1.1 752,048 - Dsui_0752 0.65 -1.9 752,059 + Dsui_0752 0.72 +0.4 752,271 - +2.4 752,329 + +0.9 752,419 + Dsui_0753 0.11 +1.0 752,438 - Dsui_0753 0.13 -0.6 752,571 + Dsui_0753 0.21 +1.0 752,680 + Dsui_0753 0.28 +1.0 752,684 + Dsui_0753 0.28 +0.4 752,731 + Dsui_0753 0.31 +1.5 752,734 - -0.6 752,867 - -0.6 752,892 - Dsui_0753 0.41 -1.1 752,969 - Dsui_0753 0.45 -1.6 753,012 - Dsui_0753 0.48 -0.9 753,132 + Dsui_0753 0.56 +0.8 753,211 + Dsui_0753 0.60 +0.9 753,259 - Dsui_0753 0.63 +0.4 753,385 + Dsui_0753 0.71 +0.5 753,559 - Dsui_0753 0.82 +1.4 753,559 - Dsui_0753 0.82 -1.7 753,693 - +0.2 753,703 - -0.6 753,704 - +0.4 753,714 - +1.0 753,727 - +1.0 754,005 - -0.3 754,016 + -1.9 754,030 + Dsui_0754 0.13 +0.4 754,030 + Dsui_0754 0.13 -0.4 754,036 + Dsui_0754 0.15 -1.6 754,084 + Dsui_0754 0.27 -0.3 754,084 + Dsui_0754 0.27 +0.4 754,085 - +2.0 754,100 - Dsui_0754 0.32 -2.1 754,100 - Dsui_0754 0.32 -0.6 754,122 - Dsui_0754 0.38 -0.2 754,185 - Dsui_0754 0.54 -1.7 754,226 + Dsui_0754 0.65 -0.6 754,272 + Dsui_0754 0.78 +0.4 754,346 + -0.1 754,365 - -0.6 754,421 + -1.9 754,438 - -0.9 754,458 - -0.6 754,492 + +0.4 754,493 - -0.6 754,500 - -1.0 754,500 - -0.6 754,549 + -0.6 754,549 + -1.7 754,583 + Dsui_0755 0.15 +0.4 754,583 + Dsui_0755 0.15 +2.4 754,589 - Dsui_0755 0.16 -1.1 754,589 - Dsui_0755 0.16 -0.9 754,591 - Dsui_0755 0.17 +0.4 754,591 - Dsui_0755 0.17 +0.9 754,602 - Dsui_0755 0.18 -0.6 754,638 + Dsui_0755 0.24 +0.4 754,648 + Dsui_0755 0.26 -0.6 754,655 + Dsui_0755 0.27 +0.4 754,655 + Dsui_0755 0.27 -1.1 754,663 - Dsui_0755 0.28 +1.6 754,781 + Dsui_0755 0.47 -1.1 754,789 - Dsui_0755 0.49 +1.6 754,832 + Dsui_0755 0.56 +0.4 754,832 + Dsui_0755 0.56 -0.6 754,840 - Dsui_0755 0.57 +0.1 754,840 - Dsui_0755 0.57 -0.0
Or see this region's nucleotide sequence