Strain Fitness in Dechlorosoma suillum PS around Dsui_0733

Experiment: ALP with Fusidic 0.007 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0731 and Dsui_0732 are separated by 12 nucleotidesDsui_0732 and Dsui_0733 are separated by 12 nucleotidesDsui_0733 and Dsui_0734 overlap by 4 nucleotidesDsui_0734 and Dsui_0735 are separated by 265 nucleotides Dsui_0731: Dsui_0731 - microcystin-dependent protein, at 729,312 to 729,833 _0731 Dsui_0732: Dsui_0732 - microcystin-dependent protein, at 729,846 to 730,379 _0732 Dsui_0733: Dsui_0733 - hypothetical protein, at 730,392 to 730,703 _0733 Dsui_0734: Dsui_0734 - acetyltransferase, at 730,700 to 731,239 _0734 Dsui_0735: Dsui_0735 - putative membrane protein, at 731,505 to 731,984 _0735 Position (kb) 730 731Strain fitness (log2 ratio) -3 -2 -1 0 1at 729.393 kb on + strand, within Dsui_0731at 729.412 kb on - strand, within Dsui_0731at 729.426 kb on + strand, within Dsui_0731at 729.435 kb on + strand, within Dsui_0731at 729.440 kb on + strand, within Dsui_0731at 729.547 kb on - strand, within Dsui_0731at 729.553 kb on + strand, within Dsui_0731at 729.591 kb on - strand, within Dsui_0731at 729.616 kb on - strand, within Dsui_0731at 729.632 kb on - strand, within Dsui_0731at 729.656 kb on - strand, within Dsui_0731at 729.663 kb on - strand, within Dsui_0731at 729.728 kb on - strand, within Dsui_0731at 729.760 kb on - strand, within Dsui_0731at 729.772 kb on + strand, within Dsui_0731at 729.777 kb on + strand, within Dsui_0731at 729.837 kb on + strandat 729.906 kb on - strand, within Dsui_0732at 730.012 kb on + strand, within Dsui_0732at 730.020 kb on - strand, within Dsui_0732at 730.097 kb on + strand, within Dsui_0732at 730.131 kb on + strandat 730.134 kb on - strand, within Dsui_0732at 730.152 kb on + strand, within Dsui_0732at 730.152 kb on + strand, within Dsui_0732at 730.160 kb on - strand, within Dsui_0732at 730.196 kb on - strand, within Dsui_0732at 730.204 kb on - strand, within Dsui_0732at 730.211 kb on + strand, within Dsui_0732at 730.219 kb on - strand, within Dsui_0732at 730.223 kb on - strand, within Dsui_0732at 730.316 kb on + strand, within Dsui_0732at 730.316 kb on + strandat 730.318 kb on + strand, within Dsui_0732at 730.324 kb on - strand, within Dsui_0732at 730.324 kb on - strand, within Dsui_0732at 730.324 kb on - strand, within Dsui_0732at 730.325 kb on - strand, within Dsui_0732at 730.333 kb on + strandat 730.398 kb on - strandat 730.498 kb on - strand, within Dsui_0733at 730.524 kb on - strand, within Dsui_0733at 730.551 kb on + strand, within Dsui_0733at 730.559 kb on - strand, within Dsui_0733at 730.607 kb on - strand, within Dsui_0733at 730.644 kb on + strand, within Dsui_0733at 730.657 kb on + strandat 730.707 kb on + strandat 730.707 kb on + strandat 730.728 kb on + strandat 730.865 kb on - strand, within Dsui_0734at 731.030 kb on - strand, within Dsui_0734at 731.080 kb on - strand, within Dsui_0734at 731.202 kb on - strandat 731.202 kb on - strandat 731.242 kb on - strandat 731.439 kb on + strandat 731.441 kb on - strandat 731.441 kb on - strandat 731.451 kb on - strandat 731.458 kb on + strandat 731.458 kb on + strandat 731.466 kb on - strandat 731.466 kb on - strandat 731.466 kb on - strandat 731.487 kb on + strandat 731.493 kb on + strandat 731.495 kb on - strandat 731.514 kb on + strandat 731.527 kb on - strandat 731.527 kb on - strandat 731.527 kb on - strandat 731.540 kb on - strandat 731.556 kb on - strand, within Dsui_0735at 731.567 kb on - strand, within Dsui_0735at 731.663 kb on - strand, within Dsui_0735at 731.675 kb on - strand, within Dsui_0735

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml
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729,393 + Dsui_0731 0.16 -0.6
729,412 - Dsui_0731 0.19 -1.1
729,426 + Dsui_0731 0.22 +0.4
729,435 + Dsui_0731 0.24 -0.6
729,440 + Dsui_0731 0.25 -0.6
729,547 - Dsui_0731 0.45 +0.4
729,553 + Dsui_0731 0.46 +0.4
729,591 - Dsui_0731 0.53 -1.1
729,616 - Dsui_0731 0.58 +0.4
729,632 - Dsui_0731 0.61 -0.6
729,656 - Dsui_0731 0.66 -1.1
729,663 - Dsui_0731 0.67 -1.1
729,728 - Dsui_0731 0.80 -0.6
729,760 - Dsui_0731 0.86 -0.6
729,772 + Dsui_0731 0.88 +0.4
729,777 + Dsui_0731 0.89 -1.1
729,837 + -0.6
729,906 - Dsui_0732 0.11 +0.4
730,012 + Dsui_0732 0.31 -0.6
730,020 - Dsui_0732 0.33 -0.6
730,097 + Dsui_0732 0.47 +0.4
730,131 + +0.4
730,134 - Dsui_0732 0.54 -1.1
730,152 + Dsui_0732 0.57 -1.1
730,152 + Dsui_0732 0.57 +0.4
730,160 - Dsui_0732 0.59 +0.4
730,196 - Dsui_0732 0.66 -0.6
730,204 - Dsui_0732 0.67 -0.6
730,211 + Dsui_0732 0.68 -1.6
730,219 - Dsui_0732 0.70 -1.1
730,223 - Dsui_0732 0.71 -0.6
730,316 + Dsui_0732 0.88 +0.4
730,316 + +0.4
730,318 + Dsui_0732 0.88 -1.6
730,324 - Dsui_0732 0.90 +0.4
730,324 - Dsui_0732 0.90 +0.4
730,324 - Dsui_0732 0.90 -1.9
730,325 - Dsui_0732 0.90 +0.4
730,333 + -1.1
730,398 - -0.6
730,498 - Dsui_0733 0.34 -2.1
730,524 - Dsui_0733 0.42 -2.6
730,551 + Dsui_0733 0.51 -0.6
730,559 - Dsui_0733 0.54 +0.4
730,607 - Dsui_0733 0.69 +0.4
730,644 + Dsui_0733 0.81 -1.9
730,657 + +0.4
730,707 + +0.4
730,707 + -1.6
730,728 + -2.9
730,865 - Dsui_0734 0.31 -0.6
731,030 - Dsui_0734 0.61 -1.6
731,080 - Dsui_0734 0.70 -0.6
731,202 - +0.4
731,202 - -1.9
731,242 - -1.6
731,439 + -1.1
731,441 - -0.6
731,441 - -0.6
731,451 - -0.6
731,458 + -0.6
731,458 + +0.4
731,466 - +0.4
731,466 - +0.4
731,466 - -1.6
731,487 + -0.6
731,493 + +0.4
731,495 - -0.6
731,514 + -1.9
731,527 - -0.6
731,527 - -2.1
731,527 - -0.6
731,540 - -0.6
731,556 - Dsui_0735 0.11 -1.1
731,567 - Dsui_0735 0.13 -0.6
731,663 - Dsui_0735 0.33 -1.9
731,675 - Dsui_0735 0.35 -0.6

Or see this region's nucleotide sequence