Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0668 and Dsui_0669 overlap by 8 nucleotides Dsui_0669 and Dsui_0671 are separated by 779 nucleotides
Dsui_0668: Dsui_0668 - putative membrane protein, at 665,635 to 668,355
_0668
Dsui_0669: Dsui_0669 - hypothetical protein, at 668,348 to 668,509
_0669
Dsui_0671: Dsui_0671 - arginase family hydrolase, arginase/agmainase/formiminoglutamate hydrolase, at 669,289 to 670,167
_0671
Position (kb) 668
669 Strain fitness (log2 ratio) -2
-1
0
1 at 667.349 kb on - strand, within Dsui_0668 at 667.351 kb on + strand, within Dsui_0668 at 667.381 kb on - strand, within Dsui_0668 at 667.480 kb on + strand, within Dsui_0668 at 667.480 kb on + strand, within Dsui_0668 at 667.499 kb on - strand, within Dsui_0668 at 667.499 kb on - strand, within Dsui_0668 at 667.513 kb on + strand at 667.513 kb on + strand, within Dsui_0668 at 667.582 kb on + strand, within Dsui_0668 at 667.692 kb on + strand, within Dsui_0668 at 667.722 kb on + strand, within Dsui_0668 at 667.760 kb on + strand, within Dsui_0668 at 667.798 kb on + strand, within Dsui_0668 at 667.829 kb on + strand, within Dsui_0668 at 667.847 kb on + strand, within Dsui_0668 at 667.855 kb on - strand, within Dsui_0668 at 667.861 kb on - strand, within Dsui_0668 at 667.920 kb on - strand, within Dsui_0668 at 668.067 kb on + strand, within Dsui_0668 at 668.075 kb on - strand, within Dsui_0668 at 668.086 kb on - strand at 668.181 kb on + strand at 668.181 kb on + strand at 668.210 kb on - strand at 668.326 kb on - strand at 668.338 kb on - strand at 668.372 kb on - strand, within Dsui_0669 at 668.387 kb on + strand, within Dsui_0669 at 668.402 kb on + strand, within Dsui_0669 at 668.412 kb on + strand, within Dsui_0669 at 668.431 kb on - strand, within Dsui_0669 at 668.499 kb on + strand at 668.606 kb on + strand at 668.660 kb on - strand at 668.660 kb on - strand at 668.702 kb on - strand at 668.705 kb on + strand at 668.705 kb on + strand at 668.713 kb on - strand at 668.713 kb on - strand at 668.941 kb on + strand at 668.968 kb on - strand at 669.067 kb on + strand at 669.149 kb on + strand at 669.155 kb on - strand at 669.168 kb on + strand at 669.417 kb on - strand, within Dsui_0671 at 669.446 kb on + strand, within Dsui_0671 at 669.483 kb on - strand, within Dsui_0671
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 667,349 - Dsui_0668 0.63 -0.6 667,351 + Dsui_0668 0.63 -1.6 667,381 - Dsui_0668 0.64 +0.4 667,480 + Dsui_0668 0.68 -0.6 667,480 + Dsui_0668 0.68 -0.6 667,499 - Dsui_0668 0.69 +0.4 667,499 - Dsui_0668 0.69 -1.2 667,513 + +0.4 667,513 + Dsui_0668 0.69 -0.6 667,582 + Dsui_0668 0.72 -0.6 667,692 + Dsui_0668 0.76 -0.6 667,722 + Dsui_0668 0.77 -1.2 667,760 + Dsui_0668 0.78 -1.2 667,798 + Dsui_0668 0.79 +0.4 667,829 + Dsui_0668 0.81 -2.2 667,847 + Dsui_0668 0.81 +0.4 667,855 - Dsui_0668 0.82 -0.6 667,861 - Dsui_0668 0.82 -0.6 667,920 - Dsui_0668 0.84 +1.4 668,067 + Dsui_0668 0.89 -2.2 668,075 - Dsui_0668 0.90 -0.3 668,086 - +0.4 668,181 + -0.4 668,181 + -1.2 668,210 - -1.6 668,326 - -0.6 668,338 - -0.6 668,372 - Dsui_0669 0.15 -1.6 668,387 + Dsui_0669 0.24 -0.6 668,402 + Dsui_0669 0.33 -0.6 668,412 + Dsui_0669 0.40 -0.6 668,431 - Dsui_0669 0.51 -1.7 668,499 + +0.4 668,606 + -2.2 668,660 - +0.4 668,660 - -0.5 668,702 - -0.2 668,705 + -1.2 668,705 + -1.9 668,713 - -0.0 668,713 - +0.2 668,941 + +0.4 668,968 - -0.0 669,067 + +0.4 669,149 + -0.6 669,155 - -0.3 669,168 + -1.2 669,417 - Dsui_0671 0.15 -0.4 669,446 + Dsui_0671 0.18 +0.4 669,483 - Dsui_0671 0.22 -0.3
Or see this region's nucleotide sequence