Strain Fitness in Dechlorosoma suillum PS around Dsui_0663

Experiment: ALP with Fusidic 0.007 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0661 and Dsui_0662 are separated by 91 nucleotidesDsui_0662 and Dsui_0663 overlap by 8 nucleotidesDsui_0663 and Dsui_0664 overlap by 14 nucleotides Dsui_0661: Dsui_0661 - rubredoxin, at 658,966 to 659,166 _0661 Dsui_0662: Dsui_0662 - phosphomethylpyrimidine kinase, at 659,258 to 660,100 _0662 Dsui_0663: Dsui_0663 - thiamine-phosphate pyrophosphorylase, at 660,093 to 660,740 _0663 Dsui_0664: Dsui_0664 - glutamate-1-semialdehyde-2,1-aminomutase, at 660,727 to 662,010 _0664 Position (kb) 660 661Strain fitness (log2 ratio) -1 0 1 2at 659.150 kb on + strandat 659.156 kb on + strandat 659.174 kb on - strandat 659.174 kb on - strandat 659.242 kb on - strandat 659.297 kb on + strandat 660.104 kb on + strandat 660.723 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml
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659,150 + +0.4
659,156 + -0.6
659,174 - +0.5
659,174 - +0.4
659,242 - -1.6
659,297 + +0.9
660,104 + +0.3
660,723 + +2.0

Or see this region's nucleotide sequence