Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0642 and Dsui_0643 are separated by 236 nucleotides Dsui_0643 and Dsui_0644 are separated by 107 nucleotides
Dsui_0642: Dsui_0642 - adenosylhomocysteinase, at 634,267 to 635,667
_0642
Dsui_0643: Dsui_0643 - HD-GYP domain-containing protein, at 635,904 to 637,133
_0643
Dsui_0644: Dsui_0644 - acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II, at 637,241 to 638,917
_0644
Position (kb) 635
636
637
638 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 635.833 kb on + strand at 635.833 kb on + strand at 635.901 kb on + strand at 635.902 kb on + strand at 635.990 kb on + strand at 635.998 kb on - strand at 636.003 kb on - strand at 636.025 kb on + strand at 636.055 kb on + strand, within Dsui_0643 at 636.063 kb on - strand, within Dsui_0643 at 636.064 kb on - strand, within Dsui_0643 at 636.100 kb on - strand, within Dsui_0643 at 636.103 kb on + strand, within Dsui_0643 at 636.171 kb on + strand, within Dsui_0643 at 636.243 kb on - strand, within Dsui_0643 at 636.247 kb on - strand, within Dsui_0643 at 636.311 kb on - strand, within Dsui_0643 at 636.331 kb on + strand, within Dsui_0643 at 636.430 kb on + strand, within Dsui_0643 at 636.457 kb on - strand, within Dsui_0643 at 636.523 kb on - strand, within Dsui_0643 at 636.623 kb on + strand at 636.743 kb on - strand, within Dsui_0643 at 636.748 kb on + strand, within Dsui_0643 at 636.844 kb on + strand, within Dsui_0643 at 636.844 kb on + strand, within Dsui_0643 at 636.860 kb on + strand, within Dsui_0643 at 636.862 kb on - strand, within Dsui_0643 at 636.958 kb on + strand, within Dsui_0643 at 637.024 kb on - strand at 637.080 kb on - strand at 637.080 kb on - strand at 637.104 kb on + strand at 637.138 kb on - strand at 637.142 kb on + strand at 637.183 kb on - strand at 637.218 kb on + strand at 637.226 kb on - strand at 637.239 kb on + strand at 637.239 kb on + strand at 637.247 kb on - strand at 637.252 kb on - strand at 637.316 kb on + strand at 637.316 kb on + strand at 637.324 kb on - strand at 637.324 kb on - strand at 637.324 kb on - strand at 637.374 kb on - strand at 637.454 kb on + strand, within Dsui_0644 at 637.572 kb on + strand, within Dsui_0644 at 637.580 kb on - strand, within Dsui_0644 at 637.580 kb on - strand, within Dsui_0644 at 637.656 kb on + strand, within Dsui_0644 at 637.662 kb on + strand, within Dsui_0644 at 637.662 kb on + strand, within Dsui_0644 at 637.662 kb on + strand, within Dsui_0644 at 637.708 kb on - strand, within Dsui_0644 at 637.808 kb on + strand, within Dsui_0644 at 637.899 kb on - strand, within Dsui_0644 at 637.965 kb on + strand, within Dsui_0644 at 637.973 kb on - strand, within Dsui_0644 at 637.978 kb on - strand, within Dsui_0644 at 638.019 kb on - strand, within Dsui_0644 at 638.036 kb on + strand, within Dsui_0644 at 638.037 kb on - strand, within Dsui_0644 at 638.128 kb on + strand, within Dsui_0644 at 638.133 kb on + strand, within Dsui_0644
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 635,833 + -0.5 635,833 + -1.5 635,901 + +0.5 635,902 + -0.5 635,990 + +0.5 635,998 - +0.2 636,003 - +1.5 636,025 + -1.9 636,055 + Dsui_0643 0.12 -0.5 636,063 - Dsui_0643 0.13 +0.8 636,064 - Dsui_0643 0.13 -1.0 636,100 - Dsui_0643 0.16 -0.4 636,103 + Dsui_0643 0.16 -1.9 636,171 + Dsui_0643 0.22 -0.5 636,243 - Dsui_0643 0.28 -0.5 636,247 - Dsui_0643 0.28 -0.1 636,311 - Dsui_0643 0.33 -1.4 636,331 + Dsui_0643 0.35 -1.1 636,430 + Dsui_0643 0.43 +1.5 636,457 - Dsui_0643 0.45 -0.4 636,523 - Dsui_0643 0.50 +1.2 636,623 + +0.5 636,743 - Dsui_0643 0.68 +0.5 636,748 + Dsui_0643 0.69 +0.5 636,844 + Dsui_0643 0.76 -1.1 636,844 + Dsui_0643 0.76 +0.5 636,860 + Dsui_0643 0.78 -0.5 636,862 - Dsui_0643 0.78 -1.1 636,958 + Dsui_0643 0.86 +0.5 637,024 - -0.1 637,080 - +0.6 637,080 - +0.3 637,104 + +0.5 637,138 - -2.1 637,142 + -1.1 637,183 - +0.5 637,218 + +0.5 637,226 - -0.5 637,239 + +0.5 637,239 + +0.5 637,247 - +0.5 637,252 - +1.5 637,316 + -0.5 637,316 + -0.5 637,324 - -1.1 637,324 - -0.5 637,324 - +0.2 637,374 - +0.5 637,454 + Dsui_0644 0.13 +0.5 637,572 + Dsui_0644 0.20 -2.1 637,580 - Dsui_0644 0.20 -1.1 637,580 - Dsui_0644 0.20 -1.5 637,656 + Dsui_0644 0.25 -2.9 637,662 + Dsui_0644 0.25 -0.5 637,662 + Dsui_0644 0.25 +0.5 637,662 + Dsui_0644 0.25 -0.5 637,708 - Dsui_0644 0.28 -2.1 637,808 + Dsui_0644 0.34 -1.5 637,899 - Dsui_0644 0.39 +0.5 637,965 + Dsui_0644 0.43 -0.5 637,973 - Dsui_0644 0.44 +0.5 637,978 - Dsui_0644 0.44 -1.5 638,019 - Dsui_0644 0.46 -1.1 638,036 + Dsui_0644 0.47 +0.5 638,037 - Dsui_0644 0.47 -3.1 638,128 + Dsui_0644 0.53 +0.5 638,133 + Dsui_0644 0.53 -2.1
Or see this region's nucleotide sequence