Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0640 and Dsui_0641 overlap by 4 nucleotides Dsui_0641 and Dsui_0642 are separated by 61 nucleotides Dsui_0642 and Dsui_0643 are separated by 236 nucleotides
Dsui_0640: Dsui_0640 - 5,10-methylenetetrahydrofolate reductase, at 633,112 to 633,951
_0640
Dsui_0641: Dsui_0641 - putative rRNA methylase, at 633,948 to 634,205
_0641
Dsui_0642: Dsui_0642 - adenosylhomocysteinase, at 634,267 to 635,667
_0642
Dsui_0643: Dsui_0643 - HD-GYP domain-containing protein, at 635,904 to 637,133
_0643
Position (kb) 634
635
636 Strain fitness (log2 ratio) -2
-1
0
1 at 633.980 kb on + strand, within Dsui_0641 at 634.058 kb on + strand, within Dsui_0641 at 634.169 kb on + strand, within Dsui_0641 at 634.258 kb on + strand at 635.833 kb on + strand at 635.833 kb on + strand at 635.901 kb on + strand at 635.902 kb on + strand at 635.990 kb on + strand at 635.998 kb on - strand at 636.003 kb on - strand at 636.025 kb on + strand at 636.055 kb on + strand, within Dsui_0643 at 636.063 kb on - strand, within Dsui_0643 at 636.064 kb on - strand, within Dsui_0643 at 636.100 kb on - strand, within Dsui_0643 at 636.103 kb on + strand, within Dsui_0643 at 636.171 kb on + strand, within Dsui_0643 at 636.243 kb on - strand, within Dsui_0643 at 636.247 kb on - strand, within Dsui_0643 at 636.311 kb on - strand, within Dsui_0643 at 636.331 kb on + strand, within Dsui_0643 at 636.430 kb on + strand, within Dsui_0643 at 636.457 kb on - strand, within Dsui_0643 at 636.523 kb on - strand, within Dsui_0643 at 636.623 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 633,980 + Dsui_0641 0.12 +0.1 634,058 + Dsui_0641 0.43 -1.1 634,169 + Dsui_0641 0.86 +0.4 634,258 + -2.1 635,833 + -0.5 635,833 + -1.5 635,901 + +0.5 635,902 + -0.5 635,990 + +0.5 635,998 - +0.2 636,003 - +1.5 636,025 + -1.9 636,055 + Dsui_0643 0.12 -0.5 636,063 - Dsui_0643 0.13 +0.8 636,064 - Dsui_0643 0.13 -1.0 636,100 - Dsui_0643 0.16 -0.4 636,103 + Dsui_0643 0.16 -1.9 636,171 + Dsui_0643 0.22 -0.5 636,243 - Dsui_0643 0.28 -0.5 636,247 - Dsui_0643 0.28 -0.1 636,311 - Dsui_0643 0.33 -1.4 636,331 + Dsui_0643 0.35 -1.1 636,430 + Dsui_0643 0.43 +1.5 636,457 - Dsui_0643 0.45 -0.4 636,523 - Dsui_0643 0.50 +1.2 636,623 + +0.5
Or see this region's nucleotide sequence