Strain Fitness in Dechlorosoma suillum PS around Dsui_0641

Experiment: ALP with Fusidic 0.007 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0640 and Dsui_0641 overlap by 4 nucleotidesDsui_0641 and Dsui_0642 are separated by 61 nucleotides Dsui_0640: Dsui_0640 - 5,10-methylenetetrahydrofolate reductase, at 633,112 to 633,951 _0640 Dsui_0641: Dsui_0641 - putative rRNA methylase, at 633,948 to 634,205 _0641 Dsui_0642: Dsui_0642 - adenosylhomocysteinase, at 634,267 to 635,667 _0642 Position (kb) 633 634 635Strain fitness (log2 ratio) -2 -1 0 1at 632.983 kb on - strandat 633.062 kb on + strandat 633.062 kb on + strandat 633.062 kb on + strandat 633.070 kb on - strandat 633.070 kb on - strandat 633.070 kb on - strandat 633.077 kb on - strandat 633.118 kb on - strandat 633.980 kb on + strand, within Dsui_0641at 634.058 kb on + strand, within Dsui_0641at 634.169 kb on + strand, within Dsui_0641at 634.258 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml
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632,983 - -0.1
633,062 + -0.7
633,062 + -0.1
633,062 + -1.7
633,070 - -0.2
633,070 - -0.3
633,070 - +0.4
633,077 - -0.1
633,118 - -0.3
633,980 + Dsui_0641 0.12 +0.1
634,058 + Dsui_0641 0.43 -1.1
634,169 + Dsui_0641 0.86 +0.4
634,258 + -2.1

Or see this region's nucleotide sequence