Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0564 and Dsui_0565 are separated by 213 nucleotides Dsui_0565 and Dsui_0566 are separated by 38 nucleotides Dsui_0566 and Dsui_0567 overlap by 4 nucleotides Dsui_0567 and Dsui_0568 are separated by 168 nucleotides
Dsui_0564: Dsui_0564 - molybdenum ABC transporter, ATP-binding protein, at 563,942 to 565,039
_0564
Dsui_0565: Dsui_0565 - hypothetical protein, at 565,253 to 565,639
_0565
Dsui_0566: Dsui_0566 - putative molybdenum utilization protein ModD, at 565,678 to 566,568
_0566
Dsui_0567: Dsui_0567 - molybdenum-pterin binding domain protein, at 566,565 to 567,395
_0567
Dsui_0568: Dsui_0568 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 567,564 to 569,480
_0568
Position (kb) 565
566
567 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 564.974 kb on - strand at 564.983 kb on - strand at 565.020 kb on - strand at 565.072 kb on - strand at 565.137 kb on - strand at 565.212 kb on + strand at 565.289 kb on + strand at 565.297 kb on - strand at 565.388 kb on - strand at 565.392 kb on - strand, within Dsui_0565 at 565.432 kb on - strand at 565.442 kb on - strand, within Dsui_0565 at 565.573 kb on - strand, within Dsui_0565 at 565.587 kb on + strand at 565.984 kb on + strand at 565.992 kb on - strand, within Dsui_0566 at 566.194 kb on - strand, within Dsui_0566 at 566.276 kb on - strand at 566.332 kb on + strand at 566.340 kb on - strand, within Dsui_0566 at 566.562 kb on + strand at 566.792 kb on - strand, within Dsui_0567 at 566.851 kb on - strand at 566.913 kb on - strand, within Dsui_0567 at 566.987 kb on + strand at 567.157 kb on + strand at 567.275 kb on - strand at 567.360 kb on - strand at 567.360 kb on - strand at 567.360 kb on - strand at 567.360 kb on - strand at 567.390 kb on - strand at 567.440 kb on + strand at 567.453 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 564,974 - +0.4 564,983 - -0.6 565,020 - -1.6 565,072 - +0.4 565,137 - -1.6 565,212 + -1.6 565,289 + -0.6 565,297 - -0.6 565,388 - +0.4 565,392 - Dsui_0565 0.36 -1.6 565,432 - +0.4 565,442 - Dsui_0565 0.49 -1.1 565,573 - Dsui_0565 0.83 -1.1 565,587 + +0.4 565,984 + +0.5 565,992 - Dsui_0566 0.35 -1.9 566,194 - Dsui_0566 0.58 -1.9 566,276 - -1.5 566,332 + +0.5 566,340 - Dsui_0566 0.74 -1.5 566,562 + -2.1 566,792 - Dsui_0567 0.27 -1.5 566,851 - +0.5 566,913 - Dsui_0567 0.42 -0.5 566,987 + +0.5 567,157 + -1.1 567,275 - +0.5 567,360 - -1.1 567,360 - +0.5 567,360 - -0.5 567,360 - -2.9 567,390 - -1.1 567,440 + -0.5 567,453 - -1.1
Or see this region's nucleotide sequence