Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0496 and Dsui_0497 are separated by 137 nucleotides Dsui_0497 and Dsui_0498 are separated by 16 nucleotides Dsui_0498 and Dsui_0499 are separated by 27 nucleotides Dsui_0499 and Dsui_0500 are separated by 31 nucleotides
Dsui_0496: Dsui_0496 - serine/threonine protein kinase, at 498,393 to 499,358
_0496
Dsui_0497: Dsui_0497 - TIGR00255 family protein, at 499,496 to 500,362
_0497
Dsui_0498: Dsui_0498 - guanylate kinase, at 500,379 to 500,987
_0498
Dsui_0499: Dsui_0499 - DNA-directed RNA polymerase, omega subunit, at 501,015 to 501,221
_0499
Dsui_0500: Dsui_0500 - (p)ppGpp synthetase, RelA/SpoT family, at 501,253 to 503,484
_0500
Position (kb) 499
500
501 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 498.766 kb on + strand, within Dsui_0496 at 498.779 kb on - strand, within Dsui_0496 at 498.786 kb on - strand, within Dsui_0496 at 499.036 kb on + strand, within Dsui_0496 at 499.108 kb on - strand, within Dsui_0496 at 499.189 kb on - strand, within Dsui_0496 at 499.204 kb on - strand, within Dsui_0496 at 499.222 kb on - strand, within Dsui_0496 at 499.338 kb on - strand at 499.401 kb on + strand at 499.514 kb on - strand at 499.557 kb on + strand at 499.562 kb on + strand at 499.572 kb on + strand at 499.789 kb on - strand, within Dsui_0497 at 499.800 kb on - strand, within Dsui_0497 at 499.823 kb on + strand, within Dsui_0497 at 499.824 kb on - strand, within Dsui_0497 at 499.896 kb on + strand, within Dsui_0497 at 499.904 kb on - strand, within Dsui_0497 at 500.026 kb on + strand, within Dsui_0497 at 500.049 kb on + strand, within Dsui_0497 at 500.077 kb on + strand, within Dsui_0497 at 500.147 kb on + strand, within Dsui_0497 at 500.164 kb on + strand, within Dsui_0497 at 500.287 kb on - strand at 500.293 kb on + strand at 501.006 kb on + strand at 501.035 kb on + strand at 501.040 kb on + strand, within Dsui_0499 at 501.134 kb on - strand, within Dsui_0499 at 501.215 kb on + strand at 501.230 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 498,766 + Dsui_0496 0.39 +0.4 498,779 - Dsui_0496 0.40 -0.5 498,786 - Dsui_0496 0.41 -0.6 499,036 + Dsui_0496 0.67 -0.6 499,108 - Dsui_0496 0.74 +0.1 499,189 - Dsui_0496 0.82 +0.4 499,204 - Dsui_0496 0.84 -0.9 499,222 - Dsui_0496 0.86 -0.3 499,338 - +0.2 499,401 + +0.1 499,514 - +0.4 499,557 + -0.4 499,562 + -0.9 499,572 + -0.1 499,789 - Dsui_0497 0.34 +0.4 499,800 - Dsui_0497 0.35 +0.4 499,823 + Dsui_0497 0.38 -0.2 499,824 - Dsui_0497 0.38 -2.6 499,896 + Dsui_0497 0.46 -0.1 499,904 - Dsui_0497 0.47 -1.2 500,026 + Dsui_0497 0.61 -0.3 500,049 + Dsui_0497 0.64 -0.8 500,077 + Dsui_0497 0.67 -0.8 500,147 + Dsui_0497 0.75 -1.3 500,164 + Dsui_0497 0.77 -1.2 500,287 - +0.4 500,293 + -1.0 501,006 + -1.5 501,035 + -0.3 501,040 + Dsui_0499 0.12 +0.8 501,134 - Dsui_0499 0.57 -0.6 501,215 + +3.4 501,230 - +0.9
Or see this region's nucleotide sequence