Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0469 and Dsui_0470 are separated by 31 nucleotides Dsui_0470 and Dsui_0471 overlap by 16 nucleotides Dsui_0471 and Dsui_0472 are separated by 10 nucleotides
Dsui_0469: Dsui_0469 - lipopolysaccharide heptosyltransferase III, putative, at 476,462 to 477,565
_0469
Dsui_0470: Dsui_0470 - fructose-2,6-bisphosphatase, at 477,597 to 478,166
_0470
Dsui_0471: Dsui_0471 - cobalamin 5''-phosphate synthase/cobalamin synthase, at 478,151 to 478,927
_0471
Dsui_0472: Dsui_0472 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, at 478,938 to 479,993
_0472
Position (kb) 478
479 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 477.165 kb on - strand, within Dsui_0469 at 477.463 kb on - strand at 477.688 kb on + strand, within Dsui_0470 at 477.696 kb on - strand, within Dsui_0470 at 477.696 kb on - strand, within Dsui_0470 at 477.798 kb on + strand at 477.918 kb on - strand, within Dsui_0470 at 477.995 kb on + strand, within Dsui_0470 at 478.134 kb on + strand at 478.169 kb on - strand at 478.169 kb on - strand at 478.199 kb on + strand at 478.325 kb on - strand, within Dsui_0471 at 478.341 kb on + strand at 478.442 kb on - strand, within Dsui_0471 at 478.583 kb on - strand, within Dsui_0471 at 478.720 kb on + strand at 478.737 kb on + strand, within Dsui_0471 at 478.943 kb on - strand at 478.943 kb on - strand at 478.992 kb on - strand at 479.080 kb on - strand, within Dsui_0472 at 479.138 kb on - strand, within Dsui_0472 at 479.251 kb on + strand at 479.283 kb on - strand, within Dsui_0472 at 479.335 kb on + strand at 479.343 kb on - strand, within Dsui_0472 at 479.582 kb on + strand, within Dsui_0472 at 479.678 kb on + strand at 479.678 kb on + strand, within Dsui_0472 at 479.752 kb on + strand, within Dsui_0472 at 479.891 kb on + strand at 479.908 kb on + strand at 479.908 kb on + strand at 479.908 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 477,165 - Dsui_0469 0.64 -0.3 477,463 - -0.1 477,688 + Dsui_0470 0.16 +1.6 477,696 - Dsui_0470 0.17 +1.1 477,696 - Dsui_0470 0.17 -0.4 477,798 + +0.4 477,918 - Dsui_0470 0.56 +1.3 477,995 + Dsui_0470 0.70 -1.1 478,134 + +0.4 478,169 - +0.4 478,169 - +0.1 478,199 + -1.9 478,325 - Dsui_0471 0.22 +0.8 478,341 + -1.1 478,442 - Dsui_0471 0.37 +0.8 478,583 - Dsui_0471 0.56 +0.5 478,720 + +0.4 478,737 + Dsui_0471 0.75 -1.6 478,943 - +0.5 478,943 - +0.1 478,992 - +0.4 479,080 - Dsui_0472 0.13 +0.6 479,138 - Dsui_0472 0.19 +0.8 479,251 + +0.4 479,283 - Dsui_0472 0.33 +0.9 479,335 + -0.6 479,343 - Dsui_0472 0.38 +0.2 479,582 + Dsui_0472 0.61 -2.1 479,678 + +0.4 479,678 + Dsui_0472 0.70 -0.6 479,752 + Dsui_0472 0.77 +0.4 479,891 + +0.4 479,908 + -2.9 479,908 + -2.1 479,908 + -0.6
Or see this region's nucleotide sequence