Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0456 and Dsui_0457 are separated by 7 nucleotides Dsui_0457 and Dsui_0458 are separated by 44 nucleotides Dsui_0458 and Dsui_0459 are separated by 26 nucleotides
Dsui_0456: Dsui_0456 - homoserine kinase, Neisseria type, at 460,877 to 461,818
_0456
Dsui_0457: Dsui_0457 - Protein of unknown function (DUF2782), at 461,826 to 462,176
_0457
Dsui_0458: Dsui_0458 - TIGR00730 family protein, at 462,221 to 462,949
_0458
Dsui_0459: Dsui_0459 - DNA polymerase I, at 462,976 to 465,708
_0459
Position (kb) 462
463 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 461.226 kb on + strand, within Dsui_0456 at 461.257 kb on - strand, within Dsui_0456 at 461.276 kb on + strand, within Dsui_0456 at 461.290 kb on - strand, within Dsui_0456 at 461.444 kb on + strand, within Dsui_0456 at 461.452 kb on - strand, within Dsui_0456 at 461.456 kb on + strand, within Dsui_0456 at 461.551 kb on + strand, within Dsui_0456 at 461.655 kb on + strand, within Dsui_0456 at 461.944 kb on - strand, within Dsui_0457 at 461.950 kb on - strand, within Dsui_0457 at 462.132 kb on + strand, within Dsui_0457 at 462.243 kb on - strand at 462.254 kb on - strand at 462.259 kb on + strand at 462.267 kb on - strand at 462.273 kb on + strand at 462.329 kb on + strand, within Dsui_0458 at 462.334 kb on + strand, within Dsui_0458 at 462.334 kb on + strand at 462.342 kb on - strand, within Dsui_0458 at 462.342 kb on - strand, within Dsui_0458 at 462.492 kb on - strand, within Dsui_0458 at 462.517 kb on + strand at 462.525 kb on - strand, within Dsui_0458 at 462.601 kb on - strand, within Dsui_0458 at 462.728 kb on - strand, within Dsui_0458 at 462.754 kb on + strand, within Dsui_0458 at 462.762 kb on - strand, within Dsui_0458 at 462.774 kb on + strand at 462.791 kb on + strand, within Dsui_0458 at 462.819 kb on + strand at 462.827 kb on - strand, within Dsui_0458 at 462.887 kb on - strand at 462.914 kb on - strand at 462.917 kb on + strand at 463.824 kb on + strand, within Dsui_0459
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 461,226 + Dsui_0456 0.37 -1.6 461,257 - Dsui_0456 0.40 -0.4 461,276 + Dsui_0456 0.42 -2.4 461,290 - Dsui_0456 0.44 -0.3 461,444 + Dsui_0456 0.60 +0.4 461,452 - Dsui_0456 0.61 -0.4 461,456 + Dsui_0456 0.61 +0.4 461,551 + Dsui_0456 0.72 -0.6 461,655 + Dsui_0456 0.83 +1.4 461,944 - Dsui_0457 0.34 -2.6 461,950 - Dsui_0457 0.35 -2.9 462,132 + Dsui_0457 0.87 +0.4 462,243 - -0.2 462,254 - -0.5 462,259 + -1.2 462,267 - -0.8 462,273 + -0.6 462,329 + Dsui_0458 0.15 -1.2 462,334 + Dsui_0458 0.16 -1.6 462,334 + +0.4 462,342 - Dsui_0458 0.17 +0.7 462,342 - Dsui_0458 0.17 +0.2 462,492 - Dsui_0458 0.37 -0.3 462,517 + +0.4 462,525 - Dsui_0458 0.42 -0.2 462,601 - Dsui_0458 0.52 +0.3 462,728 - Dsui_0458 0.70 -0.5 462,754 + Dsui_0458 0.73 -1.6 462,762 - Dsui_0458 0.74 -0.7 462,774 + +0.4 462,791 + Dsui_0458 0.78 -0.6 462,819 + +0.4 462,827 - Dsui_0458 0.83 +0.2 462,887 - -1.1 462,914 - -0.8 462,917 + +0.5 463,824 + Dsui_0459 0.31 -0.0
Or see this region's nucleotide sequence