Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0430 and Dsui_0431 are separated by 12 nucleotides Dsui_0431 and Dsui_0432 are separated by 57 nucleotides
Dsui_0430: Dsui_0430 - ABC-type branched-chain amino acid transport system, periplasmic component, at 436,104 to 437,216
_0430
Dsui_0431: Dsui_0431 - putative permease, DMT superfamily, at 437,229 to 438,065
_0431
Dsui_0432: Dsui_0432 - hypothetical protein, at 438,123 to 439,199
_0432
Position (kb) 437
438
439 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 436.247 kb on + strand, within Dsui_0430 at 436.286 kb on + strand, within Dsui_0430 at 436.327 kb on + strand, within Dsui_0430 at 436.347 kb on - strand, within Dsui_0430 at 436.404 kb on + strand, within Dsui_0430 at 436.474 kb on - strand, within Dsui_0430 at 436.474 kb on - strand, within Dsui_0430 at 436.584 kb on + strand, within Dsui_0430 at 436.720 kb on - strand, within Dsui_0430 at 436.720 kb on - strand, within Dsui_0430 at 436.744 kb on - strand, within Dsui_0430 at 436.832 kb on + strand, within Dsui_0430 at 436.906 kb on - strand at 436.942 kb on - strand, within Dsui_0430 at 436.978 kb on - strand, within Dsui_0430 at 436.990 kb on + strand, within Dsui_0430 at 436.998 kb on - strand, within Dsui_0430 at 437.164 kb on - strand at 437.217 kb on + strand at 437.220 kb on - strand at 437.225 kb on - strand at 437.225 kb on - strand at 437.415 kb on - strand, within Dsui_0431 at 437.417 kb on - strand, within Dsui_0431 at 437.422 kb on - strand, within Dsui_0431 at 437.455 kb on + strand, within Dsui_0431 at 437.455 kb on + strand, within Dsui_0431 at 437.598 kb on - strand, within Dsui_0431 at 437.611 kb on + strand, within Dsui_0431 at 437.635 kb on - strand, within Dsui_0431 at 437.637 kb on + strand, within Dsui_0431 at 437.645 kb on - strand, within Dsui_0431 at 437.702 kb on + strand, within Dsui_0431 at 437.744 kb on + strand at 437.852 kb on - strand, within Dsui_0431 at 437.856 kb on - strand, within Dsui_0431 at 437.859 kb on + strand at 437.890 kb on - strand, within Dsui_0431 at 437.932 kb on - strand at 437.948 kb on + strand, within Dsui_0431 at 437.971 kb on - strand, within Dsui_0431 at 438.026 kb on - strand at 438.044 kb on - strand at 438.060 kb on + strand at 438.260 kb on - strand, within Dsui_0432 at 438.331 kb on + strand, within Dsui_0432 at 438.390 kb on + strand at 438.506 kb on - strand, within Dsui_0432 at 439.022 kb on + strand, within Dsui_0432
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 436,247 + Dsui_0430 0.13 +0.7 436,286 + Dsui_0430 0.16 -0.1 436,327 + Dsui_0430 0.20 -1.8 436,347 - Dsui_0430 0.22 -0.5 436,404 + Dsui_0430 0.27 -0.4 436,474 - Dsui_0430 0.33 -1.5 436,474 - Dsui_0430 0.33 -0.5 436,584 + Dsui_0430 0.43 +0.0 436,720 - Dsui_0430 0.55 -1.1 436,720 - Dsui_0430 0.55 -1.1 436,744 - Dsui_0430 0.58 -0.5 436,832 + Dsui_0430 0.65 -1.1 436,906 - +0.5 436,942 - Dsui_0430 0.75 -2.4 436,978 - Dsui_0430 0.79 +0.5 436,990 + Dsui_0430 0.80 -1.6 436,998 - Dsui_0430 0.80 -1.5 437,164 - +0.4 437,217 + -0.7 437,220 - -1.9 437,225 - -1.6 437,225 - +0.4 437,415 - Dsui_0431 0.22 +2.8 437,417 - Dsui_0431 0.22 -2.9 437,422 - Dsui_0431 0.23 -1.9 437,455 + Dsui_0431 0.27 -1.6 437,455 + Dsui_0431 0.27 -0.6 437,598 - Dsui_0431 0.44 -1.1 437,611 + Dsui_0431 0.46 +0.4 437,635 - Dsui_0431 0.49 -1.5 437,637 + Dsui_0431 0.49 -3.6 437,645 - Dsui_0431 0.50 -2.4 437,702 + Dsui_0431 0.57 +0.4 437,744 + -1.1 437,852 - Dsui_0431 0.74 +0.4 437,856 - Dsui_0431 0.75 -1.1 437,859 + +0.4 437,890 - Dsui_0431 0.79 -1.1 437,932 - +0.4 437,948 + Dsui_0431 0.86 -1.1 437,971 - Dsui_0431 0.89 -0.9 438,026 - -2.4 438,044 - -1.6 438,060 + -0.6 438,260 - Dsui_0432 0.13 +0.0 438,331 + Dsui_0432 0.19 +0.4 438,390 + +0.4 438,506 - Dsui_0432 0.36 -0.4 439,022 + Dsui_0432 0.83 -2.4
Or see this region's nucleotide sequence