Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0427 and Dsui_0428 are separated by 145 nucleotides Dsui_0428 and Dsui_0429 are separated by 286 nucleotides
Dsui_0427: Dsui_0427 - NADH:flavin oxidoreductase, at 431,424 to 432,527
_0427
Dsui_0428: Dsui_0428 - methyl-accepting chemotaxis protein, at 432,673 to 434,526
_0428
Dsui_0429: Dsui_0429 - cystathionine beta-lyase/cystathionine gamma-synthase, at 434,813 to 435,961
_0429
Position (kb) 432
433
434
435 Strain fitness (log2 ratio) -1
0
1 at 431.699 kb on + strand, within Dsui_0427 at 431.706 kb on + strand, within Dsui_0427 at 431.833 kb on + strand, within Dsui_0427 at 431.892 kb on + strand, within Dsui_0427 at 431.966 kb on + strand, within Dsui_0427 at 432.033 kb on - strand at 432.128 kb on + strand, within Dsui_0427 at 432.321 kb on - strand, within Dsui_0427 at 432.355 kb on - strand, within Dsui_0427 at 432.424 kb on - strand at 432.473 kb on + strand at 432.613 kb on + strand at 432.679 kb on - strand at 432.836 kb on + strand at 432.872 kb on - strand, within Dsui_0428 at 432.991 kb on - strand, within Dsui_0428 at 433.119 kb on + strand, within Dsui_0428 at 433.242 kb on - strand, within Dsui_0428 at 433.277 kb on + strand at 433.287 kb on + strand at 433.306 kb on - strand, within Dsui_0428 at 433.361 kb on + strand at 433.556 kb on - strand, within Dsui_0428 at 433.560 kb on - strand, within Dsui_0428 at 433.610 kb on + strand, within Dsui_0428 at 433.686 kb on - strand, within Dsui_0428 at 433.708 kb on + strand, within Dsui_0428 at 433.831 kb on - strand, within Dsui_0428 at 433.910 kb on + strand, within Dsui_0428 at 434.036 kb on - strand, within Dsui_0428 at 434.037 kb on - strand, within Dsui_0428 at 434.096 kb on + strand, within Dsui_0428 at 434.125 kb on + strand, within Dsui_0428 at 434.125 kb on + strand, within Dsui_0428 at 434.202 kb on + strand, within Dsui_0428 at 434.310 kb on + strand at 434.329 kb on - strand, within Dsui_0428 at 434.381 kb on - strand at 434.686 kb on + strand at 434.823 kb on + strand at 434.823 kb on + strand at 435.011 kb on - strand, within Dsui_0429 at 435.388 kb on + strand at 435.409 kb on - strand, within Dsui_0429 at 435.409 kb on - strand at 435.524 kb on + strand, within Dsui_0429
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 431,699 + Dsui_0427 0.25 -0.8 431,706 + Dsui_0427 0.26 +0.3 431,833 + Dsui_0427 0.37 +0.6 431,892 + Dsui_0427 0.42 +0.4 431,966 + Dsui_0427 0.49 -0.3 432,033 - +0.5 432,128 + Dsui_0427 0.64 +0.7 432,321 - Dsui_0427 0.81 +0.5 432,355 - Dsui_0427 0.84 -0.1 432,424 - -0.5 432,473 + -0.2 432,613 + +0.5 432,679 - -0.1 432,836 + +0.5 432,872 - Dsui_0428 0.11 +0.0 432,991 - Dsui_0428 0.17 +0.4 433,119 + Dsui_0428 0.24 -1.1 433,242 - Dsui_0428 0.31 -0.3 433,277 + +0.5 433,287 + +0.5 433,306 - Dsui_0428 0.34 -0.4 433,361 + +0.5 433,556 - Dsui_0428 0.48 -0.9 433,560 - Dsui_0428 0.48 +0.0 433,610 + Dsui_0428 0.51 -0.5 433,686 - Dsui_0428 0.55 -0.3 433,708 + Dsui_0428 0.56 -0.5 433,831 - Dsui_0428 0.62 +0.2 433,910 + Dsui_0428 0.67 -0.5 434,036 - Dsui_0428 0.74 +0.1 434,037 - Dsui_0428 0.74 +0.7 434,096 + Dsui_0428 0.77 -0.5 434,125 + Dsui_0428 0.78 +0.5 434,125 + Dsui_0428 0.78 -1.1 434,202 + Dsui_0428 0.82 -0.5 434,310 + +0.5 434,329 - Dsui_0428 0.89 -0.7 434,381 - -0.1 434,686 + +0.5 434,823 + -0.5 434,823 + -0.5 435,011 - Dsui_0429 0.17 +0.5 435,388 + +0.5 435,409 - Dsui_0429 0.52 -0.9 435,409 - +0.5 435,524 + Dsui_0429 0.62 -0.5
Or see this region's nucleotide sequence