Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0398 and Dsui_0399 are separated by 2 nucleotides Dsui_0399 and Dsui_0400 are separated by 1 nucleotides Dsui_0400 and Dsui_0401 are separated by 121 nucleotides
Dsui_0398: Dsui_0398 - UDP-glucose-4-epimerase, at 395,875 to 396,888
_0398
Dsui_0399: Dsui_0399 - symmetrical bis(5'-nucleosyl)-tetraphosphatase, at 396,891 to 397,721
_0399
Dsui_0400: Dsui_0400 - putative nucleoside-diphosphate sugar epimerase, at 397,723 to 399,585
_0400
Dsui_0401: Dsui_0401 - nucleoside-diphosphate-sugar epimerase, at 399,707 to 400,711
_0401
Position (kb)
397
398
399
400 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 396.740 kb on + strand, within Dsui_0398 at 396.740 kb on + strand, within Dsui_0398 at 396.748 kb on - strand, within Dsui_0398 at 396.804 kb on - strand at 396.864 kb on + strand at 396.872 kb on - strand at 397.007 kb on - strand, within Dsui_0399 at 397.141 kb on + strand, within Dsui_0399 at 397.266 kb on - strand, within Dsui_0399 at 397.406 kb on - strand at 397.504 kb on + strand, within Dsui_0399 at 397.538 kb on - strand, within Dsui_0399 at 397.600 kb on + strand at 397.659 kb on + strand at 397.756 kb on - strand at 397.819 kb on + strand at 397.841 kb on + strand at 397.841 kb on + strand at 397.841 kb on + strand at 397.841 kb on + strand at 397.995 kb on - strand, within Dsui_0400 at 398.062 kb on + strand, within Dsui_0400 at 398.253 kb on + strand, within Dsui_0400 at 398.257 kb on - strand, within Dsui_0400 at 398.335 kb on + strand, within Dsui_0400 at 398.358 kb on - strand, within Dsui_0400 at 398.415 kb on + strand, within Dsui_0400 at 398.452 kb on + strand, within Dsui_0400 at 398.455 kb on + strand, within Dsui_0400 at 398.522 kb on + strand, within Dsui_0400 at 398.548 kb on - strand, within Dsui_0400 at 398.662 kb on - strand, within Dsui_0400 at 398.725 kb on + strand, within Dsui_0400 at 398.946 kb on + strand at 398.959 kb on - strand, within Dsui_0400 at 398.985 kb on + strand, within Dsui_0400 at 399.218 kb on - strand, within Dsui_0400 at 399.325 kb on + strand, within Dsui_0400 at 399.333 kb on - strand, within Dsui_0400 at 399.501 kb on + strand at 399.570 kb on + strand at 399.603 kb on - strand at 399.631 kb on + strand at 399.639 kb on - strand at 399.639 kb on - strand at 399.660 kb on + strand at 399.686 kb on - strand at 400.103 kb on + strand at 400.220 kb on - strand, within Dsui_0401 at 400.346 kb on - strand, within Dsui_0401 at 400.492 kb on - strand, within Dsui_0401
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 396,740 + Dsui_0398 0.85 -0.5 396,740 + Dsui_0398 0.85 +0.5 396,748 - Dsui_0398 0.86 -3.6 396,804 - -2.9 396,864 + +0.5 396,872 - -2.9 397,007 - Dsui_0399 0.14 +4.9 397,141 + Dsui_0399 0.30 -0.5 397,266 - Dsui_0399 0.45 +4.6 397,406 - +3.2 397,504 + Dsui_0399 0.74 -2.8 397,538 - Dsui_0399 0.78 +4.5 397,600 + +0.5 397,659 + -1.8 397,756 - -2.7 397,819 + +0.5 397,841 + -0.5 397,841 + -3.0 397,841 + -0.5 397,841 + -0.5 397,995 - Dsui_0400 0.15 -2.5 398,062 + Dsui_0400 0.18 -0.5 398,253 + Dsui_0400 0.28 -1.8 398,257 - Dsui_0400 0.29 -3.3 398,335 + Dsui_0400 0.33 +0.5 398,358 - Dsui_0400 0.34 -3.0 398,415 + Dsui_0400 0.37 +0.5 398,452 + Dsui_0400 0.39 -1.5 398,455 + Dsui_0400 0.39 +0.5 398,522 + Dsui_0400 0.43 -1.5 398,548 - Dsui_0400 0.44 -3.5 398,662 - Dsui_0400 0.50 -3.1 398,725 + Dsui_0400 0.54 +0.5 398,946 + +0.5 398,959 - Dsui_0400 0.66 -2.9 398,985 + Dsui_0400 0.68 -2.5 399,218 - Dsui_0400 0.80 -3.0 399,325 + Dsui_0400 0.86 +0.5 399,333 - Dsui_0400 0.86 -3.2 399,501 + -1.1 399,570 + +0.5 399,603 - -3.0 399,631 + +0.5 399,639 - +0.2 399,639 - -0.0 399,660 + -0.5 399,686 - -0.6 400,103 + +0.5 400,220 - Dsui_0401 0.51 -3.6 400,346 - Dsui_0401 0.64 -0.1 400,492 - Dsui_0401 0.78 -1.7
Or see this region's nucleotide sequence