Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0279 and Dsui_0280 overlap by 4 nucleotides Dsui_0280 and Dsui_0281 overlap by 1 nucleotides Dsui_0281 and Dsui_0282 are separated by 416 nucleotides
Dsui_0279: Dsui_0279 - K+-transporting ATPase, KdpA, at 280,188 to 281,996
_0279
Dsui_0280: Dsui_0280 - F subunit of K+-transporting ATPase (Potass_KdpF), at 281,993 to 282,085
_0280
Dsui_0281: Dsui_0281 - hypothetical protein, at 282,085 to 282,174
_0281
Dsui_0282: Dsui_0282 - hypothetical protein, at 282,591 to 283,034
_0282
Position (kb) 281
282
283 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 281.353 kb on - strand, within Dsui_0279 at 281.364 kb on + strand at 281.432 kb on + strand, within Dsui_0279 at 281.448 kb on - strand, within Dsui_0279 at 281.467 kb on + strand at 281.482 kb on - strand, within Dsui_0279 at 281.589 kb on + strand, within Dsui_0279 at 281.610 kb on + strand, within Dsui_0279 at 281.618 kb on - strand, within Dsui_0279 at 281.628 kb on + strand at 281.684 kb on + strand, within Dsui_0279 at 281.692 kb on - strand, within Dsui_0279 at 281.694 kb on + strand, within Dsui_0279 at 281.706 kb on + strand, within Dsui_0279 at 281.750 kb on - strand at 281.813 kb on - strand at 281.887 kb on + strand at 281.899 kb on + strand at 281.945 kb on - strand at 282.017 kb on - strand, within Dsui_0280 at 282.017 kb on - strand, within Dsui_0280 at 282.017 kb on - strand, within Dsui_0280 at 282.056 kb on + strand, within Dsui_0280 at 282.071 kb on + strand, within Dsui_0280 at 282.166 kb on - strand at 282.201 kb on - strand at 282.257 kb on - strand at 282.426 kb on - strand at 282.589 kb on + strand at 282.589 kb on + strand at 282.669 kb on - strand, within Dsui_0282 at 282.737 kb on - strand, within Dsui_0282 at 282.878 kb on - strand, within Dsui_0282 at 282.887 kb on + strand, within Dsui_0282 at 282.902 kb on + strand, within Dsui_0282 at 282.910 kb on - strand, within Dsui_0282 at 282.910 kb on - strand, within Dsui_0282 at 282.953 kb on + strand, within Dsui_0282 at 282.961 kb on - strand, within Dsui_0282 at 282.998 kb on + strand at 283.026 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 281,353 - Dsui_0279 0.64 -0.4 281,364 + +0.6 281,432 + Dsui_0279 0.69 +0.6 281,448 - Dsui_0279 0.70 +0.6 281,467 + -1.0 281,482 - Dsui_0279 0.72 +0.6 281,589 + Dsui_0279 0.77 -3.1 281,610 + Dsui_0279 0.79 +0.6 281,618 - Dsui_0279 0.79 -1.7 281,628 + +0.6 281,684 + Dsui_0279 0.83 +0.6 281,692 - Dsui_0279 0.83 -2.2 281,694 + Dsui_0279 0.83 +0.6 281,706 + Dsui_0279 0.84 -2.2 281,750 - +0.6 281,813 - +0.6 281,887 + +0.6 281,899 + +0.6 281,945 - +0.6 282,017 - Dsui_0280 0.26 -1.7 282,017 - Dsui_0280 0.26 -1.4 282,017 - Dsui_0280 0.26 +0.6 282,056 + Dsui_0280 0.68 +0.6 282,071 + Dsui_0280 0.84 -0.0 282,166 - +0.6 282,201 - -1.0 282,257 - +0.6 282,426 - -1.0 282,589 + +0.1 282,589 + +0.1 282,669 - Dsui_0282 0.18 -0.5 282,737 - Dsui_0282 0.33 -1.4 282,878 - Dsui_0282 0.65 +0.7 282,887 + Dsui_0282 0.67 -0.4 282,902 + Dsui_0282 0.70 +0.6 282,910 - Dsui_0282 0.72 -0.2 282,910 - Dsui_0282 0.72 +0.2 282,953 + Dsui_0282 0.82 -0.4 282,961 - Dsui_0282 0.83 +1.1 282,998 + -1.0 283,026 + +1.0
Or see this region's nucleotide sequence