Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0219 and Dsui_0220 are separated by 205 nucleotides Dsui_0220 and Dsui_0221 are separated by 142 nucleotides Dsui_0221 and Dsui_0222 are separated by 126 nucleotides
Dsui_0219: Dsui_0219 - anthranilate synthase component I, at 217,374 to 218,849
_0219
Dsui_0220: Dsui_0220 - 2-phosphoglycolate phosphatase, at 219,055 to 219,717
_0220
Dsui_0221: Dsui_0221 - ribulose-phosphate 3-epimerase, at 219,860 to 220,549
_0221
Dsui_0222: Dsui_0222 - uncharacterized protein affecting Mg2+/Co2+ transport, at 220,676 to 221,059
_0222
Position (kb)
219
220 Strain fitness (log2 ratio)
-2
-1
0
1 at 218.976 kb on - strand at 218.976 kb on - strand at 219.129 kb on - strand, within Dsui_0220 at 219.153 kb on - strand, within Dsui_0220 at 219.264 kb on - strand, within Dsui_0220 at 219.270 kb on - strand, within Dsui_0220 at 219.283 kb on - strand, within Dsui_0220 at 219.299 kb on - strand, within Dsui_0220 at 219.339 kb on - strand, within Dsui_0220 at 219.344 kb on - strand, within Dsui_0220 at 219.368 kb on - strand, within Dsui_0220 at 219.369 kb on - strand, within Dsui_0220 at 219.369 kb on - strand, within Dsui_0220 at 219.383 kb on - strand, within Dsui_0220 at 219.400 kb on - strand, within Dsui_0220 at 219.428 kb on - strand, within Dsui_0220 at 219.446 kb on - strand, within Dsui_0220 at 219.529 kb on - strand, within Dsui_0220 at 219.595 kb on + strand, within Dsui_0220 at 219.603 kb on - strand, within Dsui_0220 at 219.623 kb on + strand, within Dsui_0220 at 219.708 kb on + strand at 219.762 kb on - strand at 219.772 kb on + strand at 220.619 kb on + strand at 220.628 kb on + strand at 220.651 kb on - strand at 220.660 kb on + strand at 220.667 kb on + strand at 220.667 kb on + strand at 220.667 kb on + strand at 220.668 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 218,976 - +0.3 218,976 - -0.2 219,129 - Dsui_0220 0.11 +0.9 219,153 - Dsui_0220 0.15 +0.1 219,264 - Dsui_0220 0.32 -1.0 219,270 - Dsui_0220 0.32 +1.0 219,283 - Dsui_0220 0.34 +0.1 219,299 - Dsui_0220 0.37 +0.9 219,339 - Dsui_0220 0.43 +0.8 219,344 - Dsui_0220 0.44 +0.2 219,368 - Dsui_0220 0.47 -1.9 219,369 - Dsui_0220 0.47 +0.4 219,369 - Dsui_0220 0.47 +0.3 219,383 - Dsui_0220 0.49 +0.2 219,400 - Dsui_0220 0.52 +1.3 219,428 - Dsui_0220 0.56 +0.2 219,446 - Dsui_0220 0.59 +0.9 219,529 - Dsui_0220 0.71 +0.7 219,595 + Dsui_0220 0.81 -0.7 219,603 - Dsui_0220 0.83 +0.2 219,623 + Dsui_0220 0.86 -1.4 219,708 + +0.9 219,762 - +0.4 219,772 + -2.7 220,619 + -0.1 220,628 + +0.8 220,651 - -1.7 220,660 + +0.0 220,667 + +1.0 220,667 + +0.1 220,667 + +1.3 220,668 - -0.1
Or see this region's nucleotide sequence