Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0050 and Dsui_0051 are separated by 198 nucleotides Dsui_0051 and Dsui_0052 are separated by 308 nucleotides
Dsui_0050: Dsui_0050 - fructose-bisphosphate aldolase, class II, Calvin cycle subtype, at 47,046 to 48,110
_0050
Dsui_0051: Dsui_0051 - cob(II)yrinic acid a,c-diamide reductase, at 48,309 to 49,079
_0051
Dsui_0052: Dsui_0052 - pyruvate kinase, at 49,388 to 50,833
_0052
Position (kb)
48
49
50 Strain fitness (log2 ratio)
-2
-1
0
1 at 48.147 kb on - strand at 48.152 kb on - strand at 48.169 kb on - strand at 48.207 kb on - strand at 48.212 kb on + strand at 48.219 kb on + strand at 48.252 kb on + strand at 48.258 kb on + strand at 48.339 kb on - strand at 48.344 kb on - strand at 48.368 kb on - strand at 48.539 kb on + strand, within Dsui_0051 at 48.580 kb on - strand, within Dsui_0051 at 48.643 kb on + strand, within Dsui_0051 at 48.727 kb on - strand, within Dsui_0051 at 48.743 kb on + strand, within Dsui_0051 at 48.777 kb on - strand, within Dsui_0051 at 48.811 kb on - strand, within Dsui_0051 at 48.867 kb on - strand, within Dsui_0051 at 49.006 kb on + strand at 49.160 kb on + strand at 49.168 kb on - strand at 49.173 kb on - strand at 49.212 kb on + strand at 49.367 kb on - strand at 49.380 kb on + strand at 49.389 kb on - strand at 49.529 kb on + strand at 49.583 kb on - strand, within Dsui_0052 at 49.733 kb on - strand, within Dsui_0052 at 49.774 kb on + strand, within Dsui_0052 at 49.842 kb on + strand, within Dsui_0052 at 49.855 kb on - strand, within Dsui_0052 at 49.931 kb on - strand, within Dsui_0052 at 49.964 kb on - strand, within Dsui_0052 at 50.000 kb on + strand, within Dsui_0052 at 50.027 kb on + strand, within Dsui_0052
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 48,147 - -0.3 48,152 - +0.2 48,169 - -0.2 48,207 - +0.9 48,212 + -0.1 48,219 + -1.1 48,252 + -0.7 48,258 + +0.9 48,339 - +0.5 48,344 - +0.5 48,368 - +0.8 48,539 + Dsui_0051 0.30 -0.1 48,580 - Dsui_0051 0.35 +0.6 48,643 + Dsui_0051 0.43 -0.1 48,727 - Dsui_0051 0.54 +1.3 48,743 + Dsui_0051 0.56 -1.5 48,777 - Dsui_0051 0.61 -0.2 48,811 - Dsui_0051 0.65 +0.7 48,867 - Dsui_0051 0.72 +0.4 49,006 + -0.1 49,160 + -0.1 49,168 - +0.7 49,173 - +0.1 49,212 + +0.9 49,367 - +1.1 49,380 + -1.1 49,389 - -0.1 49,529 + +0.9 49,583 - Dsui_0052 0.13 -0.8 49,733 - Dsui_0052 0.24 +0.2 49,774 + Dsui_0052 0.27 -1.9 49,842 + Dsui_0052 0.31 -0.1 49,855 - Dsui_0052 0.32 +0.6 49,931 - Dsui_0052 0.38 +0.4 49,964 - Dsui_0052 0.40 +0.3 50,000 + Dsui_0052 0.42 -0.1 50,027 + Dsui_0052 0.44 -0.7
Or see this region's nucleotide sequence