Experiment: Thymidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27675 and BWI76_RS27680 are separated by 80 nucleotides BWI76_RS27680 and BWI76_RS27685 are separated by 148 nucleotides
BWI76_RS27675: BWI76_RS27675 - EmrB/QacA family drug resistance transporter, at 5,740,986 to 5,742,482
_RS27675
BWI76_RS27680: BWI76_RS27680 - TetR family transcriptional regulator, at 5,742,563 to 5,743,210
_RS27680
BWI76_RS27685: BWI76_RS27685 - N-acetyltransferase, at 5,743,359 to 5,743,775
_RS27685
Position (kb)
5742
5743
5744 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 5741.584 kb on + strand, within BWI76_RS27675 at 5741.594 kb on + strand, within BWI76_RS27675 at 5741.841 kb on + strand, within BWI76_RS27675 at 5742.099 kb on - strand, within BWI76_RS27675 at 5742.169 kb on - strand, within BWI76_RS27675 at 5742.284 kb on - strand, within BWI76_RS27675 at 5742.336 kb on - strand at 5742.477 kb on + strand at 5742.654 kb on + strand, within BWI76_RS27680 at 5742.668 kb on - strand, within BWI76_RS27680 at 5743.065 kb on + strand, within BWI76_RS27680 at 5743.073 kb on - strand, within BWI76_RS27680 at 5743.073 kb on - strand, within BWI76_RS27680 at 5743.073 kb on - strand, within BWI76_RS27680 at 5743.080 kb on + strand, within BWI76_RS27680 at 5743.170 kb on + strand at 5743.178 kb on - strand at 5743.229 kb on + strand at 5743.240 kb on + strand at 5743.247 kb on + strand at 5743.354 kb on - strand at 5743.354 kb on - strand at 5743.396 kb on - strand at 5743.492 kb on - strand, within BWI76_RS27685 at 5743.492 kb on - strand, within BWI76_RS27685 at 5743.597 kb on + strand, within BWI76_RS27685 at 5743.635 kb on + strand, within BWI76_RS27685 at 5743.669 kb on - strand, within BWI76_RS27685 at 5743.674 kb on + strand, within BWI76_RS27685 at 5743.674 kb on + strand, within BWI76_RS27685 at 5743.674 kb on + strand, within BWI76_RS27685 at 5743.674 kb on + strand, within BWI76_RS27685 at 5743.682 kb on - strand, within BWI76_RS27685 at 5743.684 kb on + strand, within BWI76_RS27685 at 5743.684 kb on + strand, within BWI76_RS27685 at 5743.685 kb on + strand, within BWI76_RS27685 at 5743.685 kb on + strand, within BWI76_RS27685 at 5743.685 kb on + strand, within BWI76_RS27685 at 5743.685 kb on + strand, within BWI76_RS27685 at 5743.685 kb on + strand, within BWI76_RS27685 at 5743.693 kb on - strand, within BWI76_RS27685 at 5743.693 kb on - strand, within BWI76_RS27685 at 5743.695 kb on + strand, within BWI76_RS27685 at 5743.713 kb on - strand, within BWI76_RS27685 at 5743.717 kb on + strand, within BWI76_RS27685 at 5743.717 kb on + strand, within BWI76_RS27685 at 5743.717 kb on + strand, within BWI76_RS27685 at 5743.717 kb on + strand, within BWI76_RS27685 at 5743.723 kb on - strand, within BWI76_RS27685 at 5743.725 kb on - strand, within BWI76_RS27685 at 5743.725 kb on - strand, within BWI76_RS27685 at 5743.725 kb on - strand, within BWI76_RS27685 at 5743.725 kb on - strand, within BWI76_RS27685 at 5743.730 kb on + strand, within BWI76_RS27685 at 5743.735 kb on - strand at 5743.759 kb on + strand at 5743.814 kb on - strand at 5743.814 kb on - strand at 5743.908 kb on + strand at 5743.916 kb on - strand at 5743.916 kb on - strand at 5743.916 kb on - strand at 5744.052 kb on + strand at 5744.097 kb on + strand at 5744.105 kb on - strand at 5744.120 kb on - strand at 5744.134 kb on + strand at 5744.153 kb on + strand at 5744.153 kb on + strand at 5744.153 kb on + strand at 5744.154 kb on + strand at 5744.161 kb on - strand at 5744.161 kb on - strand at 5744.171 kb on + strand at 5744.171 kb on + strand at 5744.171 kb on + strand at 5744.171 kb on + strand at 5744.171 kb on + strand at 5744.171 kb on + strand at 5744.171 kb on + strand at 5744.173 kb on + strand at 5744.179 kb on - strand at 5744.179 kb on - strand at 5744.179 kb on - strand at 5744.179 kb on - strand at 5744.179 kb on - strand at 5744.179 kb on - strand at 5744.179 kb on - strand at 5744.185 kb on - strand at 5744.203 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thymidine (N) remove 5,741,584 + BWI76_RS27675 0.40 -0.2 5,741,594 + BWI76_RS27675 0.41 -0.3 5,741,841 + BWI76_RS27675 0.57 +1.3 5,742,099 - BWI76_RS27675 0.74 -2.0 5,742,169 - BWI76_RS27675 0.79 -3.4 5,742,284 - BWI76_RS27675 0.87 -0.9 5,742,336 - +0.8 5,742,477 + -0.3 5,742,654 + BWI76_RS27680 0.14 -0.1 5,742,668 - BWI76_RS27680 0.16 -2.8 5,743,065 + BWI76_RS27680 0.77 -0.1 5,743,073 - BWI76_RS27680 0.79 -0.7 5,743,073 - BWI76_RS27680 0.79 -1.0 5,743,073 - BWI76_RS27680 0.79 -0.8 5,743,080 + BWI76_RS27680 0.80 +2.3 5,743,170 + +0.8 5,743,178 - +0.7 5,743,229 + -0.4 5,743,240 + -0.1 5,743,247 + +0.1 5,743,354 - -0.9 5,743,354 - -0.3 5,743,396 - +3.5 5,743,492 - BWI76_RS27685 0.32 +0.6 5,743,492 - BWI76_RS27685 0.32 -0.8 5,743,597 + BWI76_RS27685 0.57 -0.5 5,743,635 + BWI76_RS27685 0.66 +0.2 5,743,669 - BWI76_RS27685 0.74 -0.2 5,743,674 + BWI76_RS27685 0.76 +0.1 5,743,674 + BWI76_RS27685 0.76 +0.5 5,743,674 + BWI76_RS27685 0.76 +2.1 5,743,674 + BWI76_RS27685 0.76 +0.1 5,743,682 - BWI76_RS27685 0.77 -3.3 5,743,684 + BWI76_RS27685 0.78 +0.9 5,743,684 + BWI76_RS27685 0.78 +0.2 5,743,685 + BWI76_RS27685 0.78 -0.3 5,743,685 + BWI76_RS27685 0.78 -2.0 5,743,685 + BWI76_RS27685 0.78 +0.4 5,743,685 + BWI76_RS27685 0.78 +0.7 5,743,685 + BWI76_RS27685 0.78 -1.1 5,743,693 - BWI76_RS27685 0.80 -0.2 5,743,693 - BWI76_RS27685 0.80 +1.1 5,743,695 + BWI76_RS27685 0.81 -0.5 5,743,713 - BWI76_RS27685 0.85 -0.5 5,743,717 + BWI76_RS27685 0.86 -0.8 5,743,717 + BWI76_RS27685 0.86 +0.0 5,743,717 + BWI76_RS27685 0.86 -0.6 5,743,717 + BWI76_RS27685 0.86 +0.0 5,743,723 - BWI76_RS27685 0.87 +0.3 5,743,725 - BWI76_RS27685 0.88 -0.3 5,743,725 - BWI76_RS27685 0.88 +0.9 5,743,725 - BWI76_RS27685 0.88 +0.4 5,743,725 - BWI76_RS27685 0.88 -2.2 5,743,730 + BWI76_RS27685 0.89 +0.5 5,743,735 - -0.2 5,743,759 + +2.3 5,743,814 - -1.3 5,743,814 - +0.6 5,743,908 + -1.3 5,743,916 - -0.0 5,743,916 - -0.9 5,743,916 - -0.3 5,744,052 + +0.5 5,744,097 + +1.1 5,744,105 - -2.4 5,744,120 - -1.1 5,744,134 + -0.5 5,744,153 + +0.1 5,744,153 + +0.4 5,744,153 + +0.7 5,744,154 + -3.1 5,744,161 - +0.1 5,744,161 - +1.6 5,744,171 + -0.2 5,744,171 + +0.1 5,744,171 + +0.2 5,744,171 + +0.8 5,744,171 + -0.5 5,744,171 + -0.0 5,744,171 + +0.3 5,744,173 + -1.3 5,744,179 - +0.9 5,744,179 - -0.8 5,744,179 - -0.5 5,744,179 - -2.4 5,744,179 - -0.4 5,744,179 - +1.0 5,744,179 - -3.1 5,744,185 - -1.7 5,744,203 + +0.6
Or see this region's nucleotide sequence