Experiment: Thymidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22735 and BWI76_RS22740 are separated by 14 nucleotides BWI76_RS22740 and BWI76_RS22745 overlap by 4 nucleotides
BWI76_RS22735: BWI76_RS22735 - type I-E CRISPR-associated protein Cas7/Cse4/CasC, at 4,737,105 to 4,738,163
_RS22735
BWI76_RS22740: BWI76_RS22740 - type I-E CRISPR-associated protein Cse2/CasB, at 4,738,178 to 4,738,729
_RS22740
BWI76_RS22745: BWI76_RS22745 - type I-E CRISPR-associated protein Cse1/CasA, at 4,738,726 to 4,740,285
_RS22745
Position (kb) 4738
4739 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4737.215 kb on + strand, within BWI76_RS22735 at 4737.215 kb on + strand, within BWI76_RS22735 at 4737.215 kb on + strand, within BWI76_RS22735 at 4737.478 kb on + strand, within BWI76_RS22735 at 4737.602 kb on + strand, within BWI76_RS22735 at 4737.610 kb on - strand at 4737.806 kb on - strand, within BWI76_RS22735 at 4737.956 kb on + strand, within BWI76_RS22735 at 4738.074 kb on - strand at 4738.243 kb on - strand, within BWI76_RS22740 at 4738.264 kb on + strand, within BWI76_RS22740 at 4738.359 kb on + strand, within BWI76_RS22740 at 4738.359 kb on + strand, within BWI76_RS22740 at 4738.367 kb on - strand, within BWI76_RS22740 at 4738.367 kb on - strand, within BWI76_RS22740 at 4738.431 kb on - strand, within BWI76_RS22740 at 4738.494 kb on + strand, within BWI76_RS22740 at 4738.549 kb on + strand, within BWI76_RS22740 at 4738.701 kb on + strand at 4738.704 kb on - strand at 4738.846 kb on - strand at 4738.853 kb on + strand at 4739.070 kb on + strand, within BWI76_RS22745 at 4739.070 kb on + strand, within BWI76_RS22745 at 4739.070 kb on + strand, within BWI76_RS22745 at 4739.070 kb on + strand at 4739.070 kb on + strand, within BWI76_RS22745 at 4739.070 kb on + strand, within BWI76_RS22745 at 4739.070 kb on + strand, within BWI76_RS22745 at 4739.078 kb on - strand, within BWI76_RS22745 at 4739.078 kb on - strand, within BWI76_RS22745 at 4739.078 kb on - strand at 4739.078 kb on - strand, within BWI76_RS22745 at 4739.078 kb on - strand, within BWI76_RS22745 at 4739.159 kb on - strand, within BWI76_RS22745 at 4739.431 kb on - strand, within BWI76_RS22745 at 4739.490 kb on - strand, within BWI76_RS22745 at 4739.540 kb on - strand, within BWI76_RS22745 at 4739.550 kb on - strand, within BWI76_RS22745 at 4739.585 kb on + strand, within BWI76_RS22745 at 4739.593 kb on - strand, within BWI76_RS22745 at 4739.593 kb on - strand, within BWI76_RS22745 at 4739.598 kb on - strand, within BWI76_RS22745 at 4739.641 kb on - strand, within BWI76_RS22745 at 4739.663 kb on + strand, within BWI76_RS22745 at 4739.671 kb on - strand, within BWI76_RS22745
Per-strain Table
Position Strand Gene LocusTag Fraction Thymidine (N) remove 4,737,215 + BWI76_RS22735 0.10 -0.3 4,737,215 + BWI76_RS22735 0.10 +0.7 4,737,215 + BWI76_RS22735 0.10 -1.6 4,737,478 + BWI76_RS22735 0.35 +0.8 4,737,602 + BWI76_RS22735 0.47 -0.8 4,737,610 - +1.8 4,737,806 - BWI76_RS22735 0.66 -0.2 4,737,956 + BWI76_RS22735 0.80 -0.4 4,738,074 - -1.7 4,738,243 - BWI76_RS22740 0.12 +0.9 4,738,264 + BWI76_RS22740 0.16 -0.4 4,738,359 + BWI76_RS22740 0.33 +1.6 4,738,359 + BWI76_RS22740 0.33 +0.2 4,738,367 - BWI76_RS22740 0.34 +0.7 4,738,367 - BWI76_RS22740 0.34 +1.1 4,738,431 - BWI76_RS22740 0.46 +0.1 4,738,494 + BWI76_RS22740 0.57 -0.7 4,738,549 + BWI76_RS22740 0.67 +0.9 4,738,701 + +0.1 4,738,704 - -1.7 4,738,846 - +0.3 4,738,853 + +0.3 4,739,070 + BWI76_RS22745 0.22 -0.0 4,739,070 + BWI76_RS22745 0.22 -0.0 4,739,070 + BWI76_RS22745 0.22 -0.9 4,739,070 + +0.1 4,739,070 + BWI76_RS22745 0.22 +0.6 4,739,070 + BWI76_RS22745 0.22 -0.1 4,739,070 + BWI76_RS22745 0.22 -3.5 4,739,078 - BWI76_RS22745 0.23 -0.3 4,739,078 - BWI76_RS22745 0.23 +0.8 4,739,078 - -1.6 4,739,078 - BWI76_RS22745 0.23 -3.0 4,739,078 - BWI76_RS22745 0.23 +0.0 4,739,159 - BWI76_RS22745 0.28 -0.1 4,739,431 - BWI76_RS22745 0.45 +2.3 4,739,490 - BWI76_RS22745 0.49 +0.6 4,739,540 - BWI76_RS22745 0.52 -0.7 4,739,550 - BWI76_RS22745 0.53 -2.4 4,739,585 + BWI76_RS22745 0.55 -0.5 4,739,593 - BWI76_RS22745 0.56 -0.3 4,739,593 - BWI76_RS22745 0.56 +0.4 4,739,598 - BWI76_RS22745 0.56 -0.1 4,739,641 - BWI76_RS22745 0.59 +0.3 4,739,663 + BWI76_RS22745 0.60 -0.6 4,739,671 - BWI76_RS22745 0.61 +0.2
Or see this region's nucleotide sequence