Experiment: Thymidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13525 and BWI76_RS13530 overlap by 4 nucleotides BWI76_RS13530 and BWI76_RS13535 are separated by 30 nucleotides
BWI76_RS13525: BWI76_RS13525 - putative luciferase-like monooxygenase, at 2,820,046 to 2,821,047
_RS13525
BWI76_RS13530: BWI76_RS13530 - amidohydrolase family protein, at 2,821,044 to 2,822,165
_RS13530
BWI76_RS13535: BWI76_RS13535 - LLM class flavin-dependent oxidoreductase, at 2,822,196 to 2,823,512
_RS13535
Position (kb)
2821
2822
2823 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2820.358 kb on - strand, within BWI76_RS13525 at 2820.671 kb on + strand, within BWI76_RS13525 at 2820.911 kb on - strand, within BWI76_RS13525 at 2820.934 kb on + strand, within BWI76_RS13525 at 2820.990 kb on + strand at 2820.998 kb on - strand at 2821.427 kb on - strand, within BWI76_RS13530 at 2821.601 kb on - strand, within BWI76_RS13530 at 2821.712 kb on - strand, within BWI76_RS13530 at 2821.732 kb on - strand, within BWI76_RS13530 at 2821.811 kb on - strand, within BWI76_RS13530 at 2821.907 kb on + strand, within BWI76_RS13530 at 2821.907 kb on + strand, within BWI76_RS13530 at 2821.907 kb on + strand, within BWI76_RS13530 at 2821.954 kb on + strand, within BWI76_RS13530 at 2821.982 kb on + strand, within BWI76_RS13530 at 2822.029 kb on - strand, within BWI76_RS13530 at 2822.097 kb on - strand at 2822.118 kb on + strand at 2822.128 kb on - strand at 2822.168 kb on + strand at 2822.183 kb on - strand at 2822.188 kb on + strand at 2822.195 kb on - strand at 2822.195 kb on - strand at 2822.195 kb on - strand at 2822.196 kb on - strand at 2822.208 kb on + strand at 2822.229 kb on + strand at 2822.229 kb on + strand at 2822.229 kb on + strand at 2822.237 kb on - strand at 2822.237 kb on - strand at 2822.237 kb on - strand at 2822.237 kb on - strand at 2822.239 kb on + strand at 2822.264 kb on + strand at 2822.300 kb on + strand at 2822.413 kb on + strand, within BWI76_RS13535 at 2822.442 kb on - strand, within BWI76_RS13535 at 2822.461 kb on + strand, within BWI76_RS13535 at 2822.461 kb on + strand, within BWI76_RS13535 at 2822.466 kb on + strand, within BWI76_RS13535 at 2822.466 kb on + strand, within BWI76_RS13535 at 2822.471 kb on + strand, within BWI76_RS13535 at 2822.471 kb on + strand, within BWI76_RS13535 at 2822.471 kb on + strand, within BWI76_RS13535 at 2822.471 kb on + strand, within BWI76_RS13535 at 2822.471 kb on + strand, within BWI76_RS13535 at 2822.474 kb on - strand, within BWI76_RS13535 at 2822.479 kb on - strand, within BWI76_RS13535 at 2822.479 kb on - strand, within BWI76_RS13535 at 2822.479 kb on - strand, within BWI76_RS13535 at 2822.480 kb on + strand, within BWI76_RS13535 at 2822.488 kb on - strand, within BWI76_RS13535 at 2822.491 kb on - strand, within BWI76_RS13535 at 2822.502 kb on + strand, within BWI76_RS13535 at 2822.502 kb on + strand, within BWI76_RS13535 at 2822.502 kb on + strand, within BWI76_RS13535 at 2822.504 kb on + strand, within BWI76_RS13535 at 2822.504 kb on + strand, within BWI76_RS13535 at 2822.504 kb on - strand, within BWI76_RS13535 at 2822.510 kb on - strand, within BWI76_RS13535 at 2822.538 kb on + strand, within BWI76_RS13535 at 2822.567 kb on - strand, within BWI76_RS13535 at 2822.567 kb on - strand, within BWI76_RS13535 at 2822.568 kb on + strand, within BWI76_RS13535 at 2822.583 kb on - strand, within BWI76_RS13535 at 2822.591 kb on - strand, within BWI76_RS13535 at 2822.595 kb on + strand, within BWI76_RS13535 at 2822.595 kb on + strand, within BWI76_RS13535 at 2822.616 kb on + strand, within BWI76_RS13535 at 2822.624 kb on + strand at 2822.626 kb on + strand, within BWI76_RS13535 at 2822.626 kb on + strand, within BWI76_RS13535 at 2822.626 kb on + strand, within BWI76_RS13535 at 2822.634 kb on - strand, within BWI76_RS13535 at 2822.636 kb on + strand, within BWI76_RS13535 at 2822.644 kb on - strand, within BWI76_RS13535 at 2822.670 kb on + strand, within BWI76_RS13535 at 2822.670 kb on + strand, within BWI76_RS13535 at 2822.670 kb on + strand, within BWI76_RS13535 at 2822.670 kb on + strand, within BWI76_RS13535 at 2822.670 kb on + strand, within BWI76_RS13535 at 2822.670 kb on + strand, within BWI76_RS13535 at 2822.676 kb on + strand, within BWI76_RS13535 at 2822.677 kb on - strand, within BWI76_RS13535 at 2822.678 kb on - strand, within BWI76_RS13535 at 2822.678 kb on - strand, within BWI76_RS13535 at 2822.678 kb on - strand, within BWI76_RS13535 at 2822.678 kb on - strand, within BWI76_RS13535 at 2822.678 kb on - strand, within BWI76_RS13535 at 2822.678 kb on - strand, within BWI76_RS13535 at 2822.678 kb on - strand, within BWI76_RS13535 at 2822.678 kb on - strand, within BWI76_RS13535 at 2822.678 kb on - strand, within BWI76_RS13535 at 2822.679 kb on - strand, within BWI76_RS13535 at 2822.679 kb on - strand, within BWI76_RS13535 at 2822.681 kb on + strand, within BWI76_RS13535 at 2822.684 kb on + strand, within BWI76_RS13535 at 2822.689 kb on + strand, within BWI76_RS13535 at 2822.689 kb on + strand, within BWI76_RS13535 at 2822.689 kb on + strand, within BWI76_RS13535 at 2822.697 kb on - strand, within BWI76_RS13535 at 2822.723 kb on - strand, within BWI76_RS13535 at 2822.727 kb on + strand at 2822.735 kb on - strand, within BWI76_RS13535 at 2822.766 kb on - strand, within BWI76_RS13535 at 2822.817 kb on + strand, within BWI76_RS13535 at 2822.825 kb on - strand, within BWI76_RS13535 at 2822.825 kb on - strand, within BWI76_RS13535 at 2822.888 kb on - strand, within BWI76_RS13535 at 2822.895 kb on + strand, within BWI76_RS13535 at 2822.946 kb on + strand, within BWI76_RS13535 at 2822.971 kb on + strand, within BWI76_RS13535 at 2823.018 kb on - strand, within BWI76_RS13535 at 2823.018 kb on - strand, within BWI76_RS13535 at 2823.045 kb on - strand, within BWI76_RS13535 at 2823.059 kb on - strand, within BWI76_RS13535 at 2823.100 kb on - strand, within BWI76_RS13535
Per-strain Table
Position Strand Gene LocusTag Fraction Thymidine (N) remove 2,820,358 - BWI76_RS13525 0.31 -2.9 2,820,671 + BWI76_RS13525 0.62 +0.4 2,820,911 - BWI76_RS13525 0.86 +0.3 2,820,934 + BWI76_RS13525 0.89 +0.9 2,820,990 + -0.2 2,820,998 - -2.1 2,821,427 - BWI76_RS13530 0.34 -1.2 2,821,601 - BWI76_RS13530 0.50 -0.4 2,821,712 - BWI76_RS13530 0.60 -0.5 2,821,732 - BWI76_RS13530 0.61 -0.1 2,821,811 - BWI76_RS13530 0.68 -0.6 2,821,907 + BWI76_RS13530 0.77 -1.0 2,821,907 + BWI76_RS13530 0.77 -1.2 2,821,907 + BWI76_RS13530 0.77 +0.4 2,821,954 + BWI76_RS13530 0.81 -1.7 2,821,982 + BWI76_RS13530 0.84 -0.6 2,822,029 - BWI76_RS13530 0.88 -0.9 2,822,097 - +0.7 2,822,118 + -0.0 2,822,128 - +0.1 2,822,168 + +0.1 2,822,183 - +0.2 2,822,188 + +0.4 2,822,195 - +0.0 2,822,195 - +0.3 2,822,195 - +1.7 2,822,196 - +0.1 2,822,208 + -0.4 2,822,229 + -0.1 2,822,229 + -1.4 2,822,229 + -0.5 2,822,237 - -0.4 2,822,237 - -0.2 2,822,237 - -1.5 2,822,237 - -0.7 2,822,239 + +0.4 2,822,264 + +0.5 2,822,300 + +0.3 2,822,413 + BWI76_RS13535 0.16 -1.3 2,822,442 - BWI76_RS13535 0.19 -2.1 2,822,461 + BWI76_RS13535 0.20 -1.0 2,822,461 + BWI76_RS13535 0.20 +0.4 2,822,466 + BWI76_RS13535 0.21 -0.3 2,822,466 + BWI76_RS13535 0.21 -0.2 2,822,471 + BWI76_RS13535 0.21 +0.1 2,822,471 + BWI76_RS13535 0.21 +0.1 2,822,471 + BWI76_RS13535 0.21 -0.0 2,822,471 + BWI76_RS13535 0.21 +0.2 2,822,471 + BWI76_RS13535 0.21 -0.2 2,822,474 - BWI76_RS13535 0.21 +0.4 2,822,479 - BWI76_RS13535 0.21 +1.3 2,822,479 - BWI76_RS13535 0.21 -0.4 2,822,479 - BWI76_RS13535 0.21 -1.1 2,822,480 + BWI76_RS13535 0.22 +0.3 2,822,488 - BWI76_RS13535 0.22 -0.4 2,822,491 - BWI76_RS13535 0.22 +0.1 2,822,502 + BWI76_RS13535 0.23 +0.3 2,822,502 + BWI76_RS13535 0.23 -0.2 2,822,502 + BWI76_RS13535 0.23 +0.9 2,822,504 + BWI76_RS13535 0.23 -0.3 2,822,504 + BWI76_RS13535 0.23 -0.2 2,822,504 - BWI76_RS13535 0.23 -0.7 2,822,510 - BWI76_RS13535 0.24 +1.6 2,822,538 + BWI76_RS13535 0.26 -1.6 2,822,567 - BWI76_RS13535 0.28 -0.3 2,822,567 - BWI76_RS13535 0.28 -0.9 2,822,568 + BWI76_RS13535 0.28 -0.1 2,822,583 - BWI76_RS13535 0.29 -0.6 2,822,591 - BWI76_RS13535 0.30 -2.6 2,822,595 + BWI76_RS13535 0.30 +2.8 2,822,595 + BWI76_RS13535 0.30 -1.2 2,822,616 + BWI76_RS13535 0.32 -0.4 2,822,624 + +0.9 2,822,626 + BWI76_RS13535 0.33 -0.3 2,822,626 + BWI76_RS13535 0.33 +0.6 2,822,626 + BWI76_RS13535 0.33 -0.3 2,822,634 - BWI76_RS13535 0.33 +1.2 2,822,636 + BWI76_RS13535 0.33 -2.4 2,822,644 - BWI76_RS13535 0.34 -4.0 2,822,670 + BWI76_RS13535 0.36 +0.7 2,822,670 + BWI76_RS13535 0.36 +0.2 2,822,670 + BWI76_RS13535 0.36 -2.7 2,822,670 + BWI76_RS13535 0.36 -1.2 2,822,670 + BWI76_RS13535 0.36 +0.9 2,822,670 + BWI76_RS13535 0.36 -0.3 2,822,676 + BWI76_RS13535 0.36 -0.2 2,822,677 - BWI76_RS13535 0.37 -0.5 2,822,678 - BWI76_RS13535 0.37 -1.8 2,822,678 - BWI76_RS13535 0.37 -1.3 2,822,678 - BWI76_RS13535 0.37 -2.5 2,822,678 - BWI76_RS13535 0.37 -0.1 2,822,678 - BWI76_RS13535 0.37 -1.7 2,822,678 - BWI76_RS13535 0.37 -0.0 2,822,678 - BWI76_RS13535 0.37 -1.3 2,822,678 - BWI76_RS13535 0.37 -0.7 2,822,678 - BWI76_RS13535 0.37 +0.5 2,822,679 - BWI76_RS13535 0.37 -0.7 2,822,679 - BWI76_RS13535 0.37 -1.9 2,822,681 + BWI76_RS13535 0.37 -1.6 2,822,684 + BWI76_RS13535 0.37 +0.6 2,822,689 + BWI76_RS13535 0.37 +0.3 2,822,689 + BWI76_RS13535 0.37 -2.7 2,822,689 + BWI76_RS13535 0.37 +0.9 2,822,697 - BWI76_RS13535 0.38 +0.6 2,822,723 - BWI76_RS13535 0.40 +0.8 2,822,727 + +0.3 2,822,735 - BWI76_RS13535 0.41 +0.8 2,822,766 - BWI76_RS13535 0.43 +0.8 2,822,817 + BWI76_RS13535 0.47 +0.4 2,822,825 - BWI76_RS13535 0.48 -0.0 2,822,825 - BWI76_RS13535 0.48 +0.6 2,822,888 - BWI76_RS13535 0.53 +0.9 2,822,895 + BWI76_RS13535 0.53 -1.3 2,822,946 + BWI76_RS13535 0.57 -0.5 2,822,971 + BWI76_RS13535 0.59 -1.7 2,823,018 - BWI76_RS13535 0.62 -1.4 2,823,018 - BWI76_RS13535 0.62 +0.2 2,823,045 - BWI76_RS13535 0.64 -1.6 2,823,059 - BWI76_RS13535 0.66 -0.8 2,823,100 - BWI76_RS13535 0.69 +0.2
Or see this region's nucleotide sequence