Experiment: Thymidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08915 and BWI76_RS08920 are separated by 202 nucleotides BWI76_RS08920 and BWI76_RS08925 are separated by 42 nucleotides
BWI76_RS08915: BWI76_RS08915 - ATP-dependent RNA helicase RhlE, at 1,876,921 to 1,878,273
_RS08915
BWI76_RS08920: BWI76_RS08920 - ATP-dependent DNA helicase DinG, at 1,878,476 to 1,880,620
_RS08920
BWI76_RS08925: BWI76_RS08925 - DNA-binding protein YbiB, at 1,880,663 to 1,881,631
_RS08925
Position (kb)
1878
1879
1880
1881 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1877.478 kb on + strand, within BWI76_RS08915 at 1877.556 kb on + strand, within BWI76_RS08915 at 1877.564 kb on - strand, within BWI76_RS08915 at 1878.281 kb on - strand at 1878.315 kb on + strand at 1878.794 kb on - strand, within BWI76_RS08920 at 1878.794 kb on - strand, within BWI76_RS08920 at 1878.970 kb on + strand at 1879.369 kb on + strand, within BWI76_RS08920 at 1879.417 kb on + strand, within BWI76_RS08920 at 1879.455 kb on - strand, within BWI76_RS08920 at 1879.779 kb on + strand, within BWI76_RS08920 at 1879.804 kb on + strand, within BWI76_RS08920 at 1880.646 kb on + strand at 1880.773 kb on + strand, within BWI76_RS08925 at 1880.799 kb on + strand, within BWI76_RS08925 at 1881.086 kb on + strand, within BWI76_RS08925 at 1881.201 kb on - strand, within BWI76_RS08925 at 1881.368 kb on + strand, within BWI76_RS08925 at 1881.510 kb on + strand, within BWI76_RS08925
Per-strain Table
Position Strand Gene LocusTag Fraction Thymidine (N) remove 1,877,478 + BWI76_RS08915 0.41 -1.9 1,877,556 + BWI76_RS08915 0.47 -1.2 1,877,564 - BWI76_RS08915 0.48 -0.5 1,878,281 - -0.1 1,878,315 + +1.5 1,878,794 - BWI76_RS08920 0.15 +1.1 1,878,794 - BWI76_RS08920 0.15 +1.1 1,878,970 + -0.2 1,879,369 + BWI76_RS08920 0.42 -0.0 1,879,417 + BWI76_RS08920 0.44 +0.5 1,879,455 - BWI76_RS08920 0.46 -0.2 1,879,779 + BWI76_RS08920 0.61 -0.7 1,879,804 + BWI76_RS08920 0.62 -1.2 1,880,646 + -0.7 1,880,773 + BWI76_RS08925 0.11 -3.8 1,880,799 + BWI76_RS08925 0.14 -2.3 1,881,086 + BWI76_RS08925 0.44 -2.5 1,881,201 - BWI76_RS08925 0.56 -2.0 1,881,368 + BWI76_RS08925 0.73 -0.0 1,881,510 + BWI76_RS08925 0.87 -1.1
Or see this region's nucleotide sequence