Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3721

Experiment: m.b. Doxycycline hyclate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.004 mg/ml
127,523	+				-0.1
127,623	-				+0.3
127,653	+				+0.8
127,759	+		Dshi_3720	0.19	-1.1
127,773	-		Dshi_3720	0.21	+0.2
127,852	+		Dshi_3720	0.30	+1.2
127,860	-		Dshi_3720	0.31	-0.9
127,873	+		Dshi_3720	0.33	+1.0
127,911	+		Dshi_3720	0.37	-0.2
127,911	+		Dshi_3720	0.37	-1.7
127,911	+		Dshi_3720	0.37	-0.9
127,919	-		Dshi_3720	0.38	-0.4
128,013	-		Dshi_3720	0.50	-0.1
128,018	-		Dshi_3720	0.50	-0.4
128,038	+		Dshi_3720	0.53	+0.1
128,038	+		Dshi_3720	0.53	+1.3
128,038	+		Dshi_3720	0.53	-0.5
128,065	+		Dshi_3720	0.56	-0.1
128,065	+		Dshi_3720	0.56	-0.5
128,073	-		Dshi_3720	0.57	+0.0
128,158	-		Dshi_3720	0.67	-2.5
128,189	+		Dshi_3720	0.71	-0.8
128,200	+		Dshi_3720	0.72	-0.9
128,276	+		Dshi_3720	0.81	-0.3
128,284	-		Dshi_3720	0.82	-1.3
128,345	+		Dshi_3720	0.90	+0.2
128,345	+		Dshi_3720	0.90	-0.8
128,400	-				-0.5
128,462	-				-0.3
128,462	-				-0.3
128,462	-				+1.0
128,490	-		Dshi_3721	0.14	+0.4
128,527	+		Dshi_3721	0.22	+0.3
128,663	+		Dshi_3721	0.48	-0.4
128,669	+		Dshi_3721	0.49	+0.6
128,669	+		Dshi_3721	0.49	-0.6
128,671	-		Dshi_3721	0.50	+0.2
128,782	+		Dshi_3721	0.72	+0.2
128,891	+				-0.3
128,906	-				-0.8
128,906	-				-0.1
128,909	+				+0.6
128,997	+				-0.6
129,047	-				-0.3
129,060	+				+0.8
129,090	+		Dshi_3722	0.11	-0.1
129,123	+		Dshi_3722	0.13	-0.5
129,130	-		Dshi_3722	0.14	-0.0
129,206	+		Dshi_3722	0.19	-0.0
129,214	-		Dshi_3722	0.19	+1.5
129,238	+		Dshi_3722	0.21	+0.2
129,246	-		Dshi_3722	0.21	+0.2
129,281	-		Dshi_3722	0.24	+1.1
129,281	-		Dshi_3722	0.24	+0.5
129,327	-		Dshi_3722	0.27	-0.9
129,358	+		Dshi_3722	0.29	+0.7
129,366	-		Dshi_3722	0.29	-0.2
129,373	-		Dshi_3722	0.30	+0.1
129,385	-		Dshi_3722	0.30	+0.0
129,419	+		Dshi_3722	0.33	+0.5
129,419	+		Dshi_3722	0.33	-0.6
129,427	-		Dshi_3722	0.33	-0.6
129,427	-		Dshi_3722	0.33	+0.4
129,427	-		Dshi_3722	0.33	-0.1
129,427	-		Dshi_3722	0.33	+0.4
129,455	+		Dshi_3722	0.35	-0.5
129,455	+		Dshi_3722	0.35	-0.7
129,455	+		Dshi_3722	0.35	-0.3
129,463	-		Dshi_3722	0.35	-0.5
129,486	-		Dshi_3722	0.37	-0.2
129,535	+		Dshi_3722	0.40	-0.7
129,565	-		Dshi_3722	0.42	-0.0
129,583	+		Dshi_3722	0.43	-0.2
129,616	+		Dshi_3722	0.45	-0.2
129,631	+		Dshi_3722	0.46	+1.0
129,657	-		Dshi_3722	0.48	+1.4
129,673	+		Dshi_3722	0.49	-0.5
129,673	+		Dshi_3722	0.49	+0.6
129,677	+		Dshi_3722	0.49	-0.7
129,681	-		Dshi_3722	0.50	-0.5
129,681	-		Dshi_3722	0.50	+0.1
129,690	+		Dshi_3722	0.50	+0.1
129,698	-		Dshi_3722	0.51	+0.4
129,729	+		Dshi_3722	0.53	-0.7
129,737	-		Dshi_3722	0.53	-0.5
129,767	+		Dshi_3722	0.55	-0.3
129,776	+		Dshi_3722	0.56	-0.6
129,780	-		Dshi_3722	0.56	-0.9
129,830	+		Dshi_3722	0.59	+0.3
129,831	+		Dshi_3722	0.59	+0.2
129,839	-		Dshi_3722	0.60	-0.4
129,915	+		Dshi_3722	0.65	-0.0
129,915	+		Dshi_3722	0.65	-0.4
129,919	+		Dshi_3722	0.65	-0.4