Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1900

Experiment: m.b. Doxycycline hyclate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.004 mg/ml
1,981,962	+		Dshi_1899	0.54	-0.8
1,981,962	+		Dshi_1899	0.54	+0.2
1,981,989	+		Dshi_1899	0.56	-0.2
1,982,079	-		Dshi_1899	0.63	-0.2
1,982,112	+		Dshi_1899	0.65	+0.0
1,982,112	+		Dshi_1899	0.65	-0.1
1,982,178	-		Dshi_1899	0.70	-0.6
1,982,180	-		Dshi_1899	0.70	-0.6
1,982,233	+		Dshi_1899	0.74	+0.0
1,982,281	+		Dshi_1899	0.77	+0.6
1,982,315	-		Dshi_1899	0.80	-0.4
1,982,384	+		Dshi_1899	0.84	+0.7
1,982,492	-				-1.0
1,982,535	-				-0.5
1,982,552	+				+0.0
1,982,557	+				+1.0
1,982,565	-				-0.1
1,982,565	-				+1.5
1,982,565	-				-1.3
1,982,588	+				-1.0
1,982,593	+				+0.0
1,982,593	+				-0.9
1,982,593	+				+1.2
1,982,601	-				-0.0
1,982,601	-				+0.1
1,982,636	-				-0.0
1,982,745	-				+0.5
1,982,745	-				-0.2
1,982,747	+				-0.1
1,982,778	+				+0.3
1,982,834	+				-0.2
1,983,092	+		Dshi_1900	0.20	-1.3
1,983,100	-		Dshi_1900	0.21	-1.5
1,983,257	-		Dshi_1900	0.32	+0.8
1,983,366	-		Dshi_1900	0.40	-0.1
1,983,469	-		Dshi_1900	0.47	-0.8
1,983,489	+		Dshi_1900	0.49	-0.6
1,983,526	+		Dshi_1900	0.52	-0.9
1,983,529	-		Dshi_1900	0.52	-0.5
1,983,534	-		Dshi_1900	0.52	+0.3
1,983,640	-		Dshi_1900	0.60	+0.0
1,983,876	+		Dshi_1900	0.77	+0.2
1,983,996	+		Dshi_1900	0.86	+0.0
1,984,010	+		Dshi_1900	0.87	-0.4
1,984,036	+		Dshi_1900	0.89	+0.1
1,984,166	-				-0.2
1,984,269	-				+0.4
1,984,359	+				-1.1
1,984,386	-				-0.2
1,984,438	-		Dshi_1901	0.13	+0.0
1,984,516	-		Dshi_1901	0.26	-1.3
1,984,678	-		Dshi_1901	0.53	+0.5
1,984,772	-		Dshi_1901	0.69	-0.3
1,984,838	+		Dshi_1901	0.80	-0.1
1,984,846	-		Dshi_1901	0.82	+0.5
1,985,010	+				-0.5
1,985,018	-				-0.4
1,985,033	+				+0.2
1,985,076	-				-0.2
1,985,076	-				-0.4
1,985,076	-				+0.1
1,985,076	-				-0.3
1,985,076	-				-0.4
1,985,170	+		Dshi_1902	0.16	+1.0
1,985,170	+		Dshi_1902	0.16	+0.4
1,985,178	-		Dshi_1902	0.16	-0.1