Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1162

Experiment: m.b. Doxycycline hyclate 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.004 mg/ml
1,187,233	+		Dshi_1161	0.16	+0.3
1,187,487	-		Dshi_1161	0.37	-1.2
1,187,497	+		Dshi_1161	0.38	-0.5
1,187,511	+		Dshi_1161	0.39	-0.2
1,187,712	-		Dshi_1161	0.57	-0.7
1,187,877	+		Dshi_1161	0.71	-0.3
1,188,067	+		Dshi_1161	0.87	+0.0
1,188,093	+		Dshi_1161	0.90	+0.1
1,188,318	+				-2.4
1,188,547	-				-1.8
1,188,718	-		Dshi_1162	0.14	-2.9
1,188,771	-		Dshi_1162	0.15	-3.2
1,188,781	-		Dshi_1162	0.16	-2.9
1,188,822	+		Dshi_1162	0.17	-0.7
1,188,883	-		Dshi_1162	0.19	-2.9
1,188,928	+		Dshi_1162	0.20	-1.2
1,189,127	+		Dshi_1162	0.25	-0.2
1,189,136	+		Dshi_1162	0.26	-0.9
1,189,206	-		Dshi_1162	0.28	-4.4
1,189,240	-		Dshi_1162	0.29	-2.5
1,189,435	-		Dshi_1162	0.34	-2.1
1,189,658	-		Dshi_1162	0.40	-2.1
1,189,745	+		Dshi_1162	0.43	-0.8
1,190,046	-		Dshi_1162	0.51	+0.1
1,190,046	-		Dshi_1162	0.51	-1.6
1,190,127	+		Dshi_1162	0.53	-1.8
1,190,744	+		Dshi_1162	0.71	-1.4
1,190,954	+		Dshi_1162	0.77	-1.8
1,191,201	+		Dshi_1162	0.84	-2.9
1,191,223	-		Dshi_1162	0.84	-1.4
1,191,239	+		Dshi_1162	0.85	-1.9
1,191,246	-		Dshi_1162	0.85	-2.0
1,191,482	+				-1.6
1,191,494	-				-1.2
1,191,680	+				-2.9
1,191,691	-				-1.7
1,191,693	+				-4.0
1,191,812	+				-1.7
1,191,816	-				-1.0
1,191,821	-				-2.5
1,191,868	+				-0.9
1,191,876	-				-1.9
1,192,449	-		Dshi_1163	0.58	-1.1
1,192,627	-		Dshi_1163	0.73	-2.1