Experiment: Formate/Acetate-Thiosulfate (60/30-15 mM) + 0.1% Yeast Extract
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0750 and DVU0751 are separated by 395 nucleotides DVU0751 and DVU0752 are separated by 88 nucleotides
DVU0750: DVU0750 - methyl-accepting chemotaxis protein (TIGR), at 840,322 to 842,331
DVU0750
DVU0751: DVU0751 - amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR), at 842,727 to 844,517
DVU0751
DVU0752: DVU0752 - amino acid ABC transporter, amino acid-binding protein (TIGR), at 844,606 to 845,433
DVU0752
Position (kb)
842
843
844
845 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 841.786 kb on + strand, within DVU0750 at 841.795 kb on + strand, within DVU0750 at 841.941 kb on + strand, within DVU0750 at 842.009 kb on - strand, within DVU0750 at 842.027 kb on + strand, within DVU0750 at 842.250 kb on + strand at 842.256 kb on + strand at 842.314 kb on - strand at 842.316 kb on + strand at 842.316 kb on + strand at 842.333 kb on - strand at 842.345 kb on + strand at 842.369 kb on + strand at 842.470 kb on - strand at 842.593 kb on + strand at 842.779 kb on + strand at 842.797 kb on - strand at 842.853 kb on - strand at 842.874 kb on - strand at 842.898 kb on - strand at 842.980 kb on - strand, within DVU0751 at 843.006 kb on + strand, within DVU0751 at 843.014 kb on - strand, within DVU0751 at 843.048 kb on - strand, within DVU0751 at 843.105 kb on + strand, within DVU0751 at 843.113 kb on + strand, within DVU0751 at 843.162 kb on - strand, within DVU0751 at 843.229 kb on + strand, within DVU0751 at 843.237 kb on - strand, within DVU0751 at 843.271 kb on - strand, within DVU0751 at 843.271 kb on - strand, within DVU0751 at 843.363 kb on + strand, within DVU0751 at 843.420 kb on - strand, within DVU0751 at 843.455 kb on - strand, within DVU0751 at 843.496 kb on - strand, within DVU0751 at 843.879 kb on - strand, within DVU0751 at 843.926 kb on + strand, within DVU0751 at 843.957 kb on - strand, within DVU0751 at 844.003 kb on + strand, within DVU0751 at 844.003 kb on + strand, within DVU0751 at 844.003 kb on + strand, within DVU0751 at 844.011 kb on - strand, within DVU0751 at 844.068 kb on + strand, within DVU0751 at 844.277 kb on - strand, within DVU0751 at 844.301 kb on - strand, within DVU0751 at 844.325 kb on + strand, within DVU0751 at 844.402 kb on - strand at 844.440 kb on + strand at 844.466 kb on - strand at 844.472 kb on + strand at 844.472 kb on + strand at 844.479 kb on + strand at 844.479 kb on + strand at 844.480 kb on - strand at 844.480 kb on - strand at 844.486 kb on + strand at 844.557 kb on - strand at 844.584 kb on + strand at 844.584 kb on + strand at 844.584 kb on + strand at 844.592 kb on - strand at 844.592 kb on - strand at 844.592 kb on - strand at 844.592 kb on - strand at 844.599 kb on - strand at 844.599 kb on - strand at 844.897 kb on - strand, within DVU0752 at 844.904 kb on + strand, within DVU0752 at 844.932 kb on + strand, within DVU0752 at 844.937 kb on + strand, within DVU0752 at 844.945 kb on - strand, within DVU0752 at 844.988 kb on + strand, within DVU0752 at 845.018 kb on - strand, within DVU0752 at 845.031 kb on + strand, within DVU0752 at 845.036 kb on + strand, within DVU0752 at 845.036 kb on + strand, within DVU0752 at 845.044 kb on - strand, within DVU0752 at 845.076 kb on + strand, within DVU0752 at 845.189 kb on + strand, within DVU0752 at 845.197 kb on - strand, within DVU0752 at 845.227 kb on - strand, within DVU0752 at 845.350 kb on + strand, within DVU0752 at 845.358 kb on - strand at 845.397 kb on - strand at 845.411 kb on - strand at 845.421 kb on + strand at 845.455 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Formate/Acetate-Thiosulfate (60/30-15 mM) + 0.1% Yeast Extract remove 841,786 + DVU0750 0.73 +0.0 841,795 + DVU0750 0.73 -0.2 841,941 + DVU0750 0.81 +2.6 842,009 - DVU0750 0.84 -0.4 842,027 + DVU0750 0.85 +0.2 842,250 + -1.6 842,256 + -1.5 842,314 - +0.6 842,316 + +0.1 842,316 + -0.4 842,333 - -0.2 842,345 + -0.5 842,369 + -0.4 842,470 - -0.7 842,593 + -0.2 842,779 + -0.5 842,797 - +1.9 842,853 - -0.3 842,874 - +0.6 842,898 - +0.3 842,980 - DVU0751 0.14 -0.4 843,006 + DVU0751 0.16 -0.1 843,014 - DVU0751 0.16 +1.5 843,048 - DVU0751 0.18 -1.5 843,105 + DVU0751 0.21 +0.3 843,113 + DVU0751 0.22 -1.2 843,162 - DVU0751 0.24 +2.9 843,229 + DVU0751 0.28 -0.4 843,237 - DVU0751 0.28 -0.1 843,271 - DVU0751 0.30 -1.9 843,271 - DVU0751 0.30 +1.9 843,363 + DVU0751 0.36 -0.1 843,420 - DVU0751 0.39 -0.9 843,455 - DVU0751 0.41 +0.2 843,496 - DVU0751 0.43 -0.5 843,879 - DVU0751 0.64 -0.2 843,926 + DVU0751 0.67 -0.2 843,957 - DVU0751 0.69 -0.6 844,003 + DVU0751 0.71 -0.8 844,003 + DVU0751 0.71 +1.0 844,003 + DVU0751 0.71 +1.9 844,011 - DVU0751 0.72 -0.8 844,068 + DVU0751 0.75 +0.4 844,277 - DVU0751 0.87 +1.2 844,301 - DVU0751 0.88 -0.7 844,325 + DVU0751 0.89 +0.2 844,402 - +0.4 844,440 + -0.7 844,466 - -1.0 844,472 + -0.3 844,472 + +0.2 844,479 + +1.9 844,479 + +1.9 844,480 - -0.9 844,480 - -1.1 844,486 + -0.2 844,557 - -0.4 844,584 + +3.5 844,584 + -0.5 844,584 + -0.8 844,592 - +1.5 844,592 - -1.7 844,592 - +0.6 844,592 - +1.3 844,599 - -0.2 844,599 - -1.1 844,897 - DVU0752 0.35 -1.2 844,904 + DVU0752 0.36 -0.4 844,932 + DVU0752 0.39 +1.3 844,937 + DVU0752 0.40 -0.7 844,945 - DVU0752 0.41 +2.7 844,988 + DVU0752 0.46 -0.9 845,018 - DVU0752 0.50 -0.2 845,031 + DVU0752 0.51 -0.2 845,036 + DVU0752 0.52 +0.9 845,036 + DVU0752 0.52 -0.1 845,044 - DVU0752 0.53 -0.4 845,076 + DVU0752 0.57 -0.8 845,189 + DVU0752 0.70 -0.6 845,197 - DVU0752 0.71 -0.3 845,227 - DVU0752 0.75 +0.5 845,350 + DVU0752 0.90 +0.2 845,358 - +1.3 845,397 - -0.9 845,411 - +1.4 845,421 + -0.6 845,455 + -0.0
Or see this region's nucleotide sequence