Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06572 and H281DRAFT_06573 are separated by 787 nucleotides H281DRAFT_06573 and H281DRAFT_06574 are separated by 519 nucleotides
H281DRAFT_06572: H281DRAFT_06572 - Glutathione S-transferase, at 12,557 to 13,270
_06572
H281DRAFT_06573: H281DRAFT_06573 - putative addiction module antidote protein, CC2985 family, at 14,058 to 14,261
_06573
H281DRAFT_06574: H281DRAFT_06574 - PAS/PAC sensor hybrid histidine kinase (EC 2.7.13.3), at 14,781 to 16,310
_06574
Position (kb) 14
15 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 13.075 kb on + strand, within H281DRAFT_06572 at 13.076 kb on - strand, within H281DRAFT_06572 at 13.076 kb on - strand, within H281DRAFT_06572 at 13.076 kb on - strand, within H281DRAFT_06572 at 13.076 kb on - strand, within H281DRAFT_06572 at 13.097 kb on - strand, within H281DRAFT_06572 at 13.144 kb on + strand, within H281DRAFT_06572 at 13.144 kb on + strand, within H281DRAFT_06572 at 13.145 kb on - strand, within H281DRAFT_06572 at 13.145 kb on - strand, within H281DRAFT_06572 at 13.145 kb on - strand, within H281DRAFT_06572 at 13.202 kb on + strand at 13.202 kb on + strand at 13.257 kb on + strand at 13.257 kb on + strand at 13.258 kb on - strand at 13.270 kb on + strand at 13.270 kb on + strand at 13.271 kb on - strand at 13.345 kb on + strand at 13.346 kb on - strand at 13.346 kb on - strand at 13.393 kb on + strand at 13.393 kb on + strand at 13.394 kb on - strand at 13.394 kb on - strand at 13.483 kb on + strand at 13.498 kb on - strand at 13.498 kb on - strand at 13.517 kb on + strand at 13.517 kb on + strand at 13.518 kb on - strand at 13.558 kb on + strand at 13.559 kb on - strand at 13.559 kb on - strand at 13.587 kb on + strand at 13.587 kb on + strand at 13.587 kb on + strand at 13.588 kb on - strand at 13.683 kb on - strand at 13.837 kb on - strand at 13.837 kb on - strand at 13.959 kb on - strand at 13.959 kb on - strand at 13.977 kb on + strand at 14.090 kb on + strand, within H281DRAFT_06573 at 14.090 kb on + strand, within H281DRAFT_06573 at 14.091 kb on - strand, within H281DRAFT_06573 at 14.179 kb on + strand, within H281DRAFT_06573 at 14.231 kb on + strand, within H281DRAFT_06573 at 14.296 kb on - strand at 14.296 kb on - strand at 14.347 kb on - strand at 14.413 kb on + strand at 14.414 kb on - strand at 14.416 kb on - strand at 14.477 kb on + strand at 14.572 kb on + strand at 14.573 kb on - strand at 14.573 kb on - strand at 14.573 kb on - strand at 14.573 kb on - strand at 14.621 kb on - strand at 14.621 kb on - strand at 14.634 kb on - strand at 14.696 kb on + strand at 14.696 kb on + strand at 14.696 kb on + strand at 14.696 kb on + strand at 14.697 kb on - strand at 14.697 kb on - strand at 14.699 kb on - strand at 14.699 kb on - strand at 14.699 kb on - strand at 14.718 kb on - strand at 14.724 kb on + strand at 14.725 kb on - strand at 14.725 kb on - strand at 14.734 kb on - strand at 14.740 kb on + strand at 14.862 kb on + strand at 14.873 kb on + strand at 14.874 kb on - strand at 14.935 kb on - strand, within H281DRAFT_06574 at 14.936 kb on + strand, within H281DRAFT_06574 at 14.936 kb on + strand, within H281DRAFT_06574 at 14.936 kb on + strand, within H281DRAFT_06574 at 14.936 kb on + strand, within H281DRAFT_06574 at 14.936 kb on + strand, within H281DRAFT_06574 at 14.937 kb on - strand, within H281DRAFT_06574 at 14.937 kb on - strand, within H281DRAFT_06574 at 14.937 kb on - strand, within H281DRAFT_06574 at 14.977 kb on - strand, within H281DRAFT_06574 at 14.977 kb on - strand, within H281DRAFT_06574
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 13,075 + H281DRAFT_06572 0.73 +1.8 13,076 - H281DRAFT_06572 0.73 -0.4 13,076 - H281DRAFT_06572 0.73 +0.8 13,076 - H281DRAFT_06572 0.73 -0.2 13,076 - H281DRAFT_06572 0.73 -1.9 13,097 - H281DRAFT_06572 0.76 +0.9 13,144 + H281DRAFT_06572 0.82 +0.7 13,144 + H281DRAFT_06572 0.82 -0.3 13,145 - H281DRAFT_06572 0.82 -1.5 13,145 - H281DRAFT_06572 0.82 -0.6 13,145 - H281DRAFT_06572 0.82 -1.0 13,202 + +1.0 13,202 + +0.1 13,257 + +0.8 13,257 + -0.6 13,258 - -0.4 13,270 + +1.5 13,270 + +0.9 13,271 - +0.7 13,345 + +0.4 13,346 - -0.5 13,346 - -0.7 13,393 + +0.6 13,393 + +0.2 13,394 - -0.6 13,394 - -0.4 13,483 + -0.8 13,498 - +1.4 13,498 - +1.5 13,517 + -0.1 13,517 + -0.6 13,518 - -2.0 13,558 + -0.4 13,559 - +1.4 13,559 - +0.8 13,587 + -1.2 13,587 + +2.1 13,587 + -0.3 13,588 - +0.3 13,683 - +1.3 13,837 - +0.1 13,837 - -0.7 13,959 - +0.1 13,959 - +2.3 13,977 + -1.2 14,090 + H281DRAFT_06573 0.16 +1.7 14,090 + H281DRAFT_06573 0.16 -2.2 14,091 - H281DRAFT_06573 0.16 +0.0 14,179 + H281DRAFT_06573 0.59 -0.6 14,231 + H281DRAFT_06573 0.85 -1.4 14,296 - -1.0 14,296 - +1.0 14,347 - -1.3 14,413 + +0.5 14,414 - +0.0 14,416 - +1.4 14,477 + -0.1 14,572 + +1.5 14,573 - +0.3 14,573 - +0.7 14,573 - -1.2 14,573 - -0.1 14,621 - +1.0 14,621 - -1.0 14,634 - +2.7 14,696 + -0.1 14,696 + +1.4 14,696 + -0.1 14,696 + -0.3 14,697 - +1.7 14,697 - -0.3 14,699 - +0.3 14,699 - -0.2 14,699 - -0.7 14,718 - +1.1 14,724 + -2.6 14,725 - +0.9 14,725 - +1.0 14,734 - -2.3 14,740 + +1.9 14,862 + +0.3 14,873 + -1.0 14,874 - -0.4 14,935 - H281DRAFT_06574 0.10 -1.8 14,936 + H281DRAFT_06574 0.10 -0.5 14,936 + H281DRAFT_06574 0.10 +1.8 14,936 + H281DRAFT_06574 0.10 -0.7 14,936 + H281DRAFT_06574 0.10 -0.3 14,936 + H281DRAFT_06574 0.10 +0.6 14,937 - H281DRAFT_06574 0.10 +1.0 14,937 - H281DRAFT_06574 0.10 -0.8 14,937 - H281DRAFT_06574 0.10 +0.6 14,977 - H281DRAFT_06574 0.13 +0.4 14,977 - H281DRAFT_06574 0.13 -3.4
Or see this region's nucleotide sequence