Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05699 and H281DRAFT_05700 are separated by 277 nucleotides H281DRAFT_05700 and H281DRAFT_05701 are separated by 33 nucleotides H281DRAFT_05701 and H281DRAFT_05702 are separated by 95 nucleotides H281DRAFT_05702 and H281DRAFT_05703 overlap by 4 nucleotides
H281DRAFT_05699: H281DRAFT_05699 - sulfate-transporting ATPase, at 116,086 to 117,753
_05699
H281DRAFT_05700: H281DRAFT_05700 - Protein of unknown function (DUF3761), at 118,031 to 118,330
_05700
H281DRAFT_05701: H281DRAFT_05701 - glycerol 3-phosphate ABC transporter ATP-binding protein, at 118,364 to 119,452
_05701
H281DRAFT_05702: H281DRAFT_05702 - glycerol 3-phosphate ABC transporter membrane protein, at 119,548 to 120,393
_05702
H281DRAFT_05703: H281DRAFT_05703 - glycerol 3-phosphate ABC transporter membrane protein /carbohydrate ABC transporter membrane protein 1, CUT1 family, at 120,390 to 121,274
_05703
Position (kb) 118
119
120 Strain fitness (log2 ratio) -2
-1
0
1
2 at 117.371 kb on + strand, within H281DRAFT_05699 at 117.371 kb on + strand, within H281DRAFT_05699 at 117.371 kb on + strand, within H281DRAFT_05699 at 117.371 kb on + strand, within H281DRAFT_05699 at 117.372 kb on - strand, within H281DRAFT_05699 at 117.372 kb on - strand, within H281DRAFT_05699 at 117.372 kb on - strand, within H281DRAFT_05699 at 117.537 kb on - strand, within H281DRAFT_05699 at 117.743 kb on + strand at 117.743 kb on + strand at 117.744 kb on - strand at 117.744 kb on - strand at 117.744 kb on - strand at 117.814 kb on + strand at 117.835 kb on - strand at 117.955 kb on - strand at 118.032 kb on + strand at 118.033 kb on - strand at 118.033 kb on - strand at 118.095 kb on + strand, within H281DRAFT_05700 at 118.096 kb on - strand, within H281DRAFT_05700 at 118.192 kb on - strand, within H281DRAFT_05700 at 118.246 kb on - strand, within H281DRAFT_05700 at 118.555 kb on + strand, within H281DRAFT_05701 at 118.555 kb on + strand, within H281DRAFT_05701 at 118.556 kb on - strand, within H281DRAFT_05701 at 119.158 kb on - strand, within H281DRAFT_05701 at 119.182 kb on + strand, within H281DRAFT_05701 at 119.191 kb on - strand, within H281DRAFT_05701 at 119.200 kb on - strand, within H281DRAFT_05701 at 119.200 kb on - strand, within H281DRAFT_05701 at 119.751 kb on - strand, within H281DRAFT_05702 at 119.960 kb on + strand, within H281DRAFT_05702 at 119.960 kb on + strand at 119.960 kb on + strand, within H281DRAFT_05702 at 119.960 kb on + strand, within H281DRAFT_05702 at 119.961 kb on - strand, within H281DRAFT_05702 at 119.961 kb on - strand, within H281DRAFT_05702 at 119.964 kb on + strand, within H281DRAFT_05702 at 119.964 kb on + strand, within H281DRAFT_05702 at 119.964 kb on + strand, within H281DRAFT_05702 at 119.964 kb on + strand, within H281DRAFT_05702 at 119.965 kb on - strand, within H281DRAFT_05702 at 119.965 kb on - strand, within H281DRAFT_05702 at 119.965 kb on - strand, within H281DRAFT_05702 at 119.965 kb on - strand, within H281DRAFT_05702 at 119.965 kb on - strand, within H281DRAFT_05702 at 120.220 kb on - strand, within H281DRAFT_05702 at 120.344 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 117,371 + H281DRAFT_05699 0.77 +0.6 117,371 + H281DRAFT_05699 0.77 -0.1 117,371 + H281DRAFT_05699 0.77 -1.2 117,371 + H281DRAFT_05699 0.77 +1.8 117,372 - H281DRAFT_05699 0.77 +1.1 117,372 - H281DRAFT_05699 0.77 +2.0 117,372 - H281DRAFT_05699 0.77 +1.8 117,537 - H281DRAFT_05699 0.87 +0.4 117,743 + -0.2 117,743 + -1.2 117,744 - -2.2 117,744 - +0.5 117,744 - +0.1 117,814 + -2.3 117,835 - +0.5 117,955 - -0.1 118,032 + -1.7 118,033 - -1.4 118,033 - +0.3 118,095 + H281DRAFT_05700 0.21 +1.0 118,096 - H281DRAFT_05700 0.22 -0.4 118,192 - H281DRAFT_05700 0.54 +0.7 118,246 - H281DRAFT_05700 0.72 +0.2 118,555 + H281DRAFT_05701 0.18 -1.1 118,555 + H281DRAFT_05701 0.18 -0.8 118,556 - H281DRAFT_05701 0.18 -0.0 119,158 - H281DRAFT_05701 0.73 -2.0 119,182 + H281DRAFT_05701 0.75 +0.9 119,191 - H281DRAFT_05701 0.76 +1.0 119,200 - H281DRAFT_05701 0.77 -0.2 119,200 - H281DRAFT_05701 0.77 +0.3 119,751 - H281DRAFT_05702 0.24 +0.6 119,960 + H281DRAFT_05702 0.49 +0.9 119,960 + -0.1 119,960 + H281DRAFT_05702 0.49 -2.1 119,960 + H281DRAFT_05702 0.49 +0.7 119,961 - H281DRAFT_05702 0.49 +0.5 119,961 - H281DRAFT_05702 0.49 +0.8 119,964 + H281DRAFT_05702 0.49 -1.9 119,964 + H281DRAFT_05702 0.49 +1.1 119,964 + H281DRAFT_05702 0.49 -0.7 119,964 + H281DRAFT_05702 0.49 -0.3 119,965 - H281DRAFT_05702 0.49 -1.0 119,965 - H281DRAFT_05702 0.49 +0.9 119,965 - H281DRAFT_05702 0.49 -0.5 119,965 - H281DRAFT_05702 0.49 -0.2 119,965 - H281DRAFT_05702 0.49 -0.5 120,220 - H281DRAFT_05702 0.79 +0.3 120,344 - +0.8
Or see this region's nucleotide sequence