Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04835 and H281DRAFT_04836 are separated by 43 nucleotides H281DRAFT_04836 and H281DRAFT_04837 are separated by 14 nucleotides
H281DRAFT_04835: H281DRAFT_04835 - hypothetical protein, at 268,768 to 270,393
_04835
H281DRAFT_04836: H281DRAFT_04836 - Glycosyltransferase, at 270,437 to 271,813
_04836
H281DRAFT_04837: H281DRAFT_04837 - 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family, at 271,828 to 273,570
_04837
Position (kb) 270
271
272 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 270.108 kb on + strand, within H281DRAFT_04835 at 270.187 kb on + strand, within H281DRAFT_04835 at 270.188 kb on - strand at 270.213 kb on + strand, within H281DRAFT_04835 at 270.213 kb on + strand, within H281DRAFT_04835 at 270.270 kb on + strand at 270.270 kb on + strand at 270.420 kb on + strand at 270.420 kb on + strand at 271.825 kb on + strand at 271.825 kb on + strand at 271.910 kb on - strand at 271.975 kb on + strand at 271.976 kb on - strand at 271.977 kb on + strand at 271.977 kb on + strand at 271.978 kb on - strand at 271.978 kb on - strand at 271.978 kb on - strand at 271.978 kb on - strand at 271.978 kb on - strand at 271.978 kb on - strand at 272.079 kb on + strand, within H281DRAFT_04837 at 272.094 kb on - strand, within H281DRAFT_04837 at 272.115 kb on - strand, within H281DRAFT_04837 at 272.147 kb on + strand, within H281DRAFT_04837 at 272.148 kb on - strand, within H281DRAFT_04837 at 272.262 kb on + strand, within H281DRAFT_04837 at 272.272 kb on + strand, within H281DRAFT_04837 at 272.327 kb on - strand, within H281DRAFT_04837 at 272.441 kb on + strand, within H281DRAFT_04837 at 272.441 kb on + strand, within H281DRAFT_04837 at 272.441 kb on + strand, within H281DRAFT_04837 at 272.441 kb on + strand, within H281DRAFT_04837 at 272.442 kb on - strand, within H281DRAFT_04837 at 272.494 kb on - strand, within H281DRAFT_04837 at 272.505 kb on - strand, within H281DRAFT_04837 at 272.513 kb on + strand, within H281DRAFT_04837 at 272.523 kb on + strand, within H281DRAFT_04837 at 272.534 kb on - strand, within H281DRAFT_04837 at 272.690 kb on + strand, within H281DRAFT_04837 at 272.761 kb on - strand, within H281DRAFT_04837 at 272.761 kb on - strand, within H281DRAFT_04837 at 272.776 kb on + strand, within H281DRAFT_04837
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 270,108 + H281DRAFT_04835 0.82 -0.4 270,187 + H281DRAFT_04835 0.87 -0.4 270,188 - -0.2 270,213 + H281DRAFT_04835 0.89 -0.8 270,213 + H281DRAFT_04835 0.89 -1.7 270,270 + +2.4 270,270 + +1.9 270,420 + +0.1 270,420 + -2.7 271,825 + -1.5 271,825 + +1.9 271,910 - +3.4 271,975 + +0.4 271,976 - +3.6 271,977 + +3.3 271,977 + +2.1 271,978 - +3.2 271,978 - +3.2 271,978 - +3.4 271,978 - +3.8 271,978 - +3.3 271,978 - +3.4 272,079 + H281DRAFT_04837 0.14 +2.9 272,094 - H281DRAFT_04837 0.15 +4.1 272,115 - H281DRAFT_04837 0.16 +3.3 272,147 + H281DRAFT_04837 0.18 +3.2 272,148 - H281DRAFT_04837 0.18 +3.8 272,262 + H281DRAFT_04837 0.25 +2.8 272,272 + H281DRAFT_04837 0.25 +2.3 272,327 - H281DRAFT_04837 0.29 +3.2 272,441 + H281DRAFT_04837 0.35 +1.8 272,441 + H281DRAFT_04837 0.35 +1.9 272,441 + H281DRAFT_04837 0.35 +2.3 272,441 + H281DRAFT_04837 0.35 +2.2 272,442 - H281DRAFT_04837 0.35 +3.5 272,494 - H281DRAFT_04837 0.38 +2.4 272,505 - H281DRAFT_04837 0.39 +3.1 272,513 + H281DRAFT_04837 0.39 +2.5 272,523 + H281DRAFT_04837 0.40 +3.1 272,534 - H281DRAFT_04837 0.41 +2.7 272,690 + H281DRAFT_04837 0.49 +3.1 272,761 - H281DRAFT_04837 0.54 +3.2 272,761 - H281DRAFT_04837 0.54 +2.5 272,776 + H281DRAFT_04837 0.54 +1.2
Or see this region's nucleotide sequence