Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04239 and H281DRAFT_04240 are separated by 93 nucleotides H281DRAFT_04240 and H281DRAFT_04241 are separated by 91 nucleotides H281DRAFT_04241 and H281DRAFT_04242 are separated by 19 nucleotides
H281DRAFT_04239: H281DRAFT_04239 - tRNA-i(6)A37 thiotransferase enzyme MiaB, at 357,296 to 358,681
_04239
H281DRAFT_04240: H281DRAFT_04240 - phosphate starvation-inducible protein PhoH, at 358,775 to 359,848
_04240
H281DRAFT_04241: H281DRAFT_04241 - probable rRNA maturation factor, at 359,940 to 360,401
_04241
H281DRAFT_04242: H281DRAFT_04242 - cation transport protein ChaC, at 360,421 to 361,134
_04242
Position (kb) 358
359
360 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 357.782 kb on + strand, within H281DRAFT_04239 at 357.782 kb on + strand, within H281DRAFT_04239 at 357.783 kb on - strand, within H281DRAFT_04239 at 357.798 kb on - strand, within H281DRAFT_04239 at 357.799 kb on + strand, within H281DRAFT_04239 at 357.800 kb on - strand, within H281DRAFT_04239 at 357.816 kb on + strand, within H281DRAFT_04239 at 357.972 kb on - strand, within H281DRAFT_04239 at 358.007 kb on + strand, within H281DRAFT_04239 at 358.055 kb on + strand, within H281DRAFT_04239 at 358.055 kb on + strand, within H281DRAFT_04239 at 358.055 kb on + strand, within H281DRAFT_04239 at 358.056 kb on - strand, within H281DRAFT_04239 at 358.289 kb on + strand, within H281DRAFT_04239 at 358.290 kb on - strand, within H281DRAFT_04239 at 358.313 kb on + strand, within H281DRAFT_04239 at 358.314 kb on - strand, within H281DRAFT_04239 at 358.314 kb on - strand, within H281DRAFT_04239 at 358.314 kb on - strand, within H281DRAFT_04239 at 358.314 kb on - strand, within H281DRAFT_04239 at 358.604 kb on + strand at 358.921 kb on + strand, within H281DRAFT_04240 at 358.973 kb on + strand, within H281DRAFT_04240 at 359.177 kb on + strand, within H281DRAFT_04240 at 359.177 kb on + strand, within H281DRAFT_04240 at 359.177 kb on + strand, within H281DRAFT_04240 at 359.225 kb on + strand, within H281DRAFT_04240 at 359.291 kb on + strand, within H281DRAFT_04240 at 359.453 kb on + strand, within H281DRAFT_04240 at 359.453 kb on + strand, within H281DRAFT_04240 at 359.454 kb on - strand, within H281DRAFT_04240 at 359.525 kb on + strand, within H281DRAFT_04240 at 359.525 kb on + strand, within H281DRAFT_04240 at 359.724 kb on + strand, within H281DRAFT_04240 at 359.724 kb on + strand, within H281DRAFT_04240 at 359.725 kb on - strand, within H281DRAFT_04240 at 360.399 kb on + strand at 360.399 kb on + strand at 360.399 kb on + strand at 360.399 kb on + strand at 360.469 kb on + strand at 360.566 kb on + strand, within H281DRAFT_04242 at 360.566 kb on + strand, within H281DRAFT_04242 at 360.567 kb on - strand, within H281DRAFT_04242 at 360.567 kb on - strand, within H281DRAFT_04242 at 360.567 kb on - strand, within H281DRAFT_04242 at 360.662 kb on - strand, within H281DRAFT_04242 at 360.662 kb on - strand, within H281DRAFT_04242 at 360.662 kb on - strand, within H281DRAFT_04242
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 357,782 + H281DRAFT_04239 0.35 -1.1 357,782 + H281DRAFT_04239 0.35 -0.3 357,783 - H281DRAFT_04239 0.35 -0.4 357,798 - H281DRAFT_04239 0.36 -0.9 357,799 + H281DRAFT_04239 0.36 +0.9 357,800 - H281DRAFT_04239 0.36 +1.5 357,816 + H281DRAFT_04239 0.38 +1.7 357,972 - H281DRAFT_04239 0.49 +0.5 358,007 + H281DRAFT_04239 0.51 -0.8 358,055 + H281DRAFT_04239 0.55 +1.3 358,055 + H281DRAFT_04239 0.55 +2.3 358,055 + H281DRAFT_04239 0.55 +0.4 358,056 - H281DRAFT_04239 0.55 -0.1 358,289 + H281DRAFT_04239 0.72 +0.1 358,290 - H281DRAFT_04239 0.72 -1.6 358,313 + H281DRAFT_04239 0.73 -0.3 358,314 - H281DRAFT_04239 0.73 +1.1 358,314 - H281DRAFT_04239 0.73 +0.3 358,314 - H281DRAFT_04239 0.73 +0.3 358,314 - H281DRAFT_04239 0.73 +0.8 358,604 + +0.8 358,921 + H281DRAFT_04240 0.14 -0.3 358,973 + H281DRAFT_04240 0.18 -2.8 359,177 + H281DRAFT_04240 0.37 -1.5 359,177 + H281DRAFT_04240 0.37 -1.5 359,177 + H281DRAFT_04240 0.37 -0.8 359,225 + H281DRAFT_04240 0.42 -1.4 359,291 + H281DRAFT_04240 0.48 -0.9 359,453 + H281DRAFT_04240 0.63 +0.2 359,453 + H281DRAFT_04240 0.63 +0.3 359,454 - H281DRAFT_04240 0.63 -2.4 359,525 + H281DRAFT_04240 0.70 -0.6 359,525 + H281DRAFT_04240 0.70 -1.2 359,724 + H281DRAFT_04240 0.88 -0.3 359,724 + H281DRAFT_04240 0.88 -2.3 359,725 - H281DRAFT_04240 0.88 -1.0 360,399 + +0.5 360,399 + +0.5 360,399 + +0.0 360,399 + -0.2 360,469 + -3.2 360,566 + H281DRAFT_04242 0.20 +0.3 360,566 + H281DRAFT_04242 0.20 +0.4 360,567 - H281DRAFT_04242 0.20 +0.1 360,567 - H281DRAFT_04242 0.20 -1.4 360,567 - H281DRAFT_04242 0.20 +0.1 360,662 - H281DRAFT_04242 0.34 +0.7 360,662 - H281DRAFT_04242 0.34 -2.5 360,662 - H281DRAFT_04242 0.34 +0.5
Or see this region's nucleotide sequence