Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03233 and H281DRAFT_03234 are separated by 89 nucleotides H281DRAFT_03234 and H281DRAFT_03235 are separated by 45 nucleotides H281DRAFT_03235 and H281DRAFT_03236 are separated by 3 nucleotides
H281DRAFT_03233: H281DRAFT_03233 - cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases, at 286,156 to 287,442
_03233
H281DRAFT_03234: H281DRAFT_03234 - chemotaxis protein MotA, at 287,532 to 288,296
_03234
H281DRAFT_03235: H281DRAFT_03235 - chemotaxis protein MotB, at 288,342 to 289,034
_03235
H281DRAFT_03236: H281DRAFT_03236 - thioredoxin reductase (NADPH), at 289,038 to 290,711
_03236
Position (kb) 288
289
290 Strain fitness (log2 ratio) -2
-1
0
1
2 at 287.549 kb on - strand at 287.701 kb on - strand, within H281DRAFT_03234 at 288.045 kb on - strand, within H281DRAFT_03234 at 288.102 kb on + strand, within H281DRAFT_03234 at 288.192 kb on + strand, within H281DRAFT_03234 at 288.486 kb on + strand, within H281DRAFT_03235 at 288.850 kb on - strand, within H281DRAFT_03235 at 288.917 kb on + strand, within H281DRAFT_03235 at 289.018 kb on + strand at 289.057 kb on + strand at 289.065 kb on + strand at 289.275 kb on - strand, within H281DRAFT_03236 at 289.275 kb on - strand, within H281DRAFT_03236 at 289.444 kb on + strand, within H281DRAFT_03236 at 289.606 kb on + strand, within H281DRAFT_03236 at 289.606 kb on + strand, within H281DRAFT_03236 at 289.607 kb on - strand, within H281DRAFT_03236 at 289.862 kb on - strand at 289.948 kb on + strand, within H281DRAFT_03236
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 287,549 - +1.3 287,701 - H281DRAFT_03234 0.22 +1.8 288,045 - H281DRAFT_03234 0.67 +1.1 288,102 + H281DRAFT_03234 0.75 -0.6 288,192 + H281DRAFT_03234 0.86 +1.3 288,486 + H281DRAFT_03235 0.21 -0.6 288,850 - H281DRAFT_03235 0.73 -0.1 288,917 + H281DRAFT_03235 0.83 +0.1 289,018 + +0.6 289,057 + -0.3 289,065 + +0.7 289,275 - H281DRAFT_03236 0.14 -0.7 289,275 - H281DRAFT_03236 0.14 +0.0 289,444 + H281DRAFT_03236 0.24 -2.0 289,606 + H281DRAFT_03236 0.34 -0.7 289,606 + H281DRAFT_03236 0.34 -1.5 289,607 - H281DRAFT_03236 0.34 -0.1 289,862 - +1.5 289,948 + H281DRAFT_03236 0.54 +0.3
Or see this region's nucleotide sequence