Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03221 and H281DRAFT_03222 are separated by 192 nucleotides H281DRAFT_03222 and H281DRAFT_03223 are separated by 21 nucleotides
H281DRAFT_03221: H281DRAFT_03221 - DNA-binding transcriptional regulator, LysR family, at 269,306 to 270,355
_03221
H281DRAFT_03222: H281DRAFT_03222 - Penicillin binding protein transpeptidase domain-containing protein, at 270,548 to 273,634
_03222
H281DRAFT_03223: H281DRAFT_03223 - Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain, at 273,656 to 274,888
_03223
Position (kb) 270
271
272
273
274 Strain fitness (log2 ratio) -1
0
1 at 269.571 kb on + strand, within H281DRAFT_03221 at 270.234 kb on + strand, within H281DRAFT_03221 at 270.681 kb on + strand at 270.798 kb on - strand at 270.933 kb on - strand, within H281DRAFT_03222 at 271.167 kb on + strand, within H281DRAFT_03222 at 271.305 kb on - strand, within H281DRAFT_03222 at 271.355 kb on + strand, within H281DRAFT_03222 at 272.041 kb on + strand, within H281DRAFT_03222 at 272.099 kb on + strand, within H281DRAFT_03222 at 272.211 kb on - strand, within H281DRAFT_03222 at 272.534 kb on + strand, within H281DRAFT_03222 at 272.535 kb on - strand, within H281DRAFT_03222 at 272.559 kb on - strand, within H281DRAFT_03222 at 272.645 kb on - strand, within H281DRAFT_03222 at 272.762 kb on + strand, within H281DRAFT_03222 at 272.800 kb on + strand, within H281DRAFT_03222 at 272.913 kb on - strand, within H281DRAFT_03222 at 273.051 kb on - strand, within H281DRAFT_03222 at 274.586 kb on + strand, within H281DRAFT_03223
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 269,571 + H281DRAFT_03221 0.25 +0.1 270,234 + H281DRAFT_03221 0.88 -0.4 270,681 + +0.7 270,798 - -1.5 270,933 - H281DRAFT_03222 0.12 -0.3 271,167 + H281DRAFT_03222 0.20 +0.1 271,305 - H281DRAFT_03222 0.25 +0.6 271,355 + H281DRAFT_03222 0.26 -0.1 272,041 + H281DRAFT_03222 0.48 -1.7 272,099 + H281DRAFT_03222 0.50 +0.7 272,211 - H281DRAFT_03222 0.54 +1.0 272,534 + H281DRAFT_03222 0.64 -0.8 272,535 - H281DRAFT_03222 0.64 -0.6 272,559 - H281DRAFT_03222 0.65 -0.4 272,645 - H281DRAFT_03222 0.68 +0.5 272,762 + H281DRAFT_03222 0.72 -0.1 272,800 + H281DRAFT_03222 0.73 +0.5 272,913 - H281DRAFT_03222 0.77 +1.1 273,051 - H281DRAFT_03222 0.81 +0.7 274,586 + H281DRAFT_03223 0.75 -0.0
Or see this region's nucleotide sequence