Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03141 and H281DRAFT_03142 are separated by 266 nucleotides H281DRAFT_03142 and H281DRAFT_03143 are separated by 199 nucleotides
H281DRAFT_03141: H281DRAFT_03141 - sulfate permease, SulP family, at 178,474 to 179,961
_03141
H281DRAFT_03142: H281DRAFT_03142 - Lipid-binding SYLF domain-containing protein, at 180,228 to 180,818
_03142
H281DRAFT_03143: H281DRAFT_03143 - FAD/FMN-containing dehydrogenase, at 181,018 to 182,406
_03143
Position (kb) 180
181 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 179.249 kb on + strand, within H281DRAFT_03141 at 179.249 kb on + strand, within H281DRAFT_03141 at 179.352 kb on + strand, within H281DRAFT_03141 at 179.442 kb on - strand, within H281DRAFT_03141 at 179.668 kb on + strand, within H281DRAFT_03141 at 179.688 kb on - strand, within H281DRAFT_03141 at 179.944 kb on - strand at 179.956 kb on - strand at 180.404 kb on + strand, within H281DRAFT_03142 at 180.505 kb on + strand, within H281DRAFT_03142 at 180.505 kb on + strand, within H281DRAFT_03142 at 180.505 kb on + strand, within H281DRAFT_03142 at 180.506 kb on - strand at 180.506 kb on - strand, within H281DRAFT_03142 at 180.649 kb on + strand at 180.821 kb on + strand at 180.822 kb on - strand at 180.822 kb on - strand at 180.833 kb on + strand at 180.833 kb on + strand at 180.833 kb on + strand at 180.833 kb on + strand at 181.055 kb on - strand at 181.101 kb on - strand at 181.112 kb on + strand at 181.113 kb on - strand at 181.160 kb on + strand, within H281DRAFT_03143 at 181.160 kb on + strand, within H281DRAFT_03143 at 181.160 kb on + strand, within H281DRAFT_03143 at 181.161 kb on - strand, within H281DRAFT_03143 at 181.587 kb on - strand, within H281DRAFT_03143 at 181.587 kb on - strand, within H281DRAFT_03143
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 179,249 + H281DRAFT_03141 0.52 -1.4 179,249 + H281DRAFT_03141 0.52 -1.0 179,352 + H281DRAFT_03141 0.59 +0.7 179,442 - H281DRAFT_03141 0.65 -1.7 179,668 + H281DRAFT_03141 0.80 -0.2 179,688 - H281DRAFT_03141 0.82 +0.8 179,944 - +1.4 179,956 - +0.6 180,404 + H281DRAFT_03142 0.30 -2.1 180,505 + H281DRAFT_03142 0.47 +1.2 180,505 + H281DRAFT_03142 0.47 +0.6 180,505 + H281DRAFT_03142 0.47 +1.1 180,506 - -0.9 180,506 - H281DRAFT_03142 0.47 -3.2 180,649 + +2.7 180,821 + -0.6 180,822 - -0.8 180,822 - +1.6 180,833 + -2.6 180,833 + -0.6 180,833 + +0.3 180,833 + +0.2 181,055 - -2.9 181,101 - +1.3 181,112 + +0.7 181,113 - +1.2 181,160 + H281DRAFT_03143 0.10 -0.6 181,160 + H281DRAFT_03143 0.10 +0.1 181,160 + H281DRAFT_03143 0.10 -1.3 181,161 - H281DRAFT_03143 0.10 -1.3 181,587 - H281DRAFT_03143 0.41 -1.8 181,587 - H281DRAFT_03143 0.41 -0.6
Or see this region's nucleotide sequence