Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03130 and H281DRAFT_03131 are separated by 475 nucleotides H281DRAFT_03131 and H281DRAFT_03132 are separated by 104 nucleotides
H281DRAFT_03130: H281DRAFT_03130 - transcriptional regulator, XRE family with cupin sensor, at 164,481 to 165,053
_03130
H281DRAFT_03131: H281DRAFT_03131 - proton-dependent oligopeptide transporter, POT family, at 165,529 to 167,070
_03131
H281DRAFT_03132: H281DRAFT_03132 - transcriptional regulator, GntR family, at 167,175 to 168,662
_03132
Position (kb) 165
166
167
168 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 164.642 kb on - strand, within H281DRAFT_03130 at 164.642 kb on - strand, within H281DRAFT_03130 at 165.090 kb on - strand at 165.179 kb on + strand at 165.180 kb on - strand at 165.180 kb on - strand at 165.180 kb on - strand at 165.287 kb on - strand at 165.392 kb on - strand at 165.392 kb on - strand at 165.523 kb on + strand at 165.797 kb on + strand, within H281DRAFT_03131 at 165.857 kb on - strand, within H281DRAFT_03131 at 165.931 kb on + strand, within H281DRAFT_03131 at 165.973 kb on + strand, within H281DRAFT_03131 at 165.976 kb on + strand, within H281DRAFT_03131 at 165.977 kb on - strand, within H281DRAFT_03131 at 166.100 kb on - strand, within H281DRAFT_03131 at 166.384 kb on + strand, within H281DRAFT_03131 at 166.384 kb on + strand at 166.384 kb on + strand, within H281DRAFT_03131 at 166.385 kb on - strand, within H281DRAFT_03131 at 166.468 kb on - strand, within H281DRAFT_03131 at 166.546 kb on - strand, within H281DRAFT_03131 at 166.760 kb on - strand at 166.760 kb on - strand, within H281DRAFT_03131 at 166.902 kb on + strand, within H281DRAFT_03131 at 166.903 kb on - strand, within H281DRAFT_03131 at 167.141 kb on + strand at 167.367 kb on + strand, within H281DRAFT_03132 at 167.673 kb on + strand, within H281DRAFT_03132 at 167.674 kb on - strand, within H281DRAFT_03132
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 164,642 - H281DRAFT_03130 0.28 +0.4 164,642 - H281DRAFT_03130 0.28 -0.5 165,090 - +0.4 165,179 + -3.9 165,180 - +1.1 165,180 - +1.0 165,180 - +0.9 165,287 - +1.3 165,392 - +1.3 165,392 - +0.9 165,523 + +0.5 165,797 + H281DRAFT_03131 0.17 +0.9 165,857 - H281DRAFT_03131 0.21 +1.9 165,931 + H281DRAFT_03131 0.26 +0.0 165,973 + H281DRAFT_03131 0.29 -1.2 165,976 + H281DRAFT_03131 0.29 +0.8 165,977 - H281DRAFT_03131 0.29 +2.0 166,100 - H281DRAFT_03131 0.37 -1.3 166,384 + H281DRAFT_03131 0.55 +2.0 166,384 + +0.7 166,384 + H281DRAFT_03131 0.55 +1.3 166,385 - H281DRAFT_03131 0.56 -0.9 166,468 - H281DRAFT_03131 0.61 +0.9 166,546 - H281DRAFT_03131 0.66 +0.0 166,760 - -0.3 166,760 - H281DRAFT_03131 0.80 +0.8 166,902 + H281DRAFT_03131 0.89 +1.1 166,903 - H281DRAFT_03131 0.89 +1.3 167,141 + +0.7 167,367 + H281DRAFT_03132 0.13 +0.5 167,673 + H281DRAFT_03132 0.33 -0.2 167,674 - H281DRAFT_03132 0.34 -0.8
Or see this region's nucleotide sequence