Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03063 and H281DRAFT_03064 are separated by 32 nucleotides H281DRAFT_03064 and H281DRAFT_03065 are separated by 88 nucleotides H281DRAFT_03065 and H281DRAFT_03066 are separated by 107 nucleotides
H281DRAFT_03063: H281DRAFT_03063 - protein-L-isoaspartate(D-aspartate) O-methyltransferase, at 95,358 to 96,155
_03063
H281DRAFT_03064: H281DRAFT_03064 - Uncharacterized conserved protein, at 96,188 to 96,526
_03064
H281DRAFT_03065: H281DRAFT_03065 - MFS transporter, DHA1 family, multidrug resistance protein, at 96,615 to 97,877
_03065
H281DRAFT_03066: H281DRAFT_03066 - transcriptional regulator, LysR family, at 97,985 to 98,911
_03066
Position (kb) 96
97
98 Strain fitness (log2 ratio) -2
-1
0
1 at 95.628 kb on + strand, within H281DRAFT_03063 at 95.629 kb on - strand, within H281DRAFT_03063 at 95.667 kb on + strand, within H281DRAFT_03063 at 95.668 kb on - strand, within H281DRAFT_03063 at 95.732 kb on - strand, within H281DRAFT_03063 at 95.899 kb on - strand, within H281DRAFT_03063 at 96.461 kb on + strand, within H281DRAFT_03064 at 96.489 kb on + strand, within H281DRAFT_03064 at 96.489 kb on + strand, within H281DRAFT_03064 at 96.489 kb on + strand, within H281DRAFT_03064 at 96.490 kb on - strand at 97.058 kb on + strand, within H281DRAFT_03065 at 97.059 kb on - strand, within H281DRAFT_03065 at 97.059 kb on - strand, within H281DRAFT_03065 at 97.442 kb on + strand, within H281DRAFT_03065 at 97.555 kb on - strand, within H281DRAFT_03065 at 97.711 kb on + strand at 97.712 kb on - strand, within H281DRAFT_03065 at 97.924 kb on - strand at 98.243 kb on - strand, within H281DRAFT_03066 at 98.263 kb on + strand, within H281DRAFT_03066 at 98.782 kb on + strand, within H281DRAFT_03066 at 98.783 kb on - strand, within H281DRAFT_03066
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 95,628 + H281DRAFT_03063 0.34 -0.1 95,629 - H281DRAFT_03063 0.34 +0.1 95,667 + H281DRAFT_03063 0.39 -2.0 95,668 - H281DRAFT_03063 0.39 +0.9 95,732 - H281DRAFT_03063 0.47 +0.7 95,899 - H281DRAFT_03063 0.68 +0.2 96,461 + H281DRAFT_03064 0.81 +0.9 96,489 + H281DRAFT_03064 0.89 -0.1 96,489 + H281DRAFT_03064 0.89 -0.2 96,489 + H281DRAFT_03064 0.89 -0.1 96,490 - +1.4 97,058 + H281DRAFT_03065 0.35 +0.7 97,059 - H281DRAFT_03065 0.35 -0.9 97,059 - H281DRAFT_03065 0.35 -0.3 97,442 + H281DRAFT_03065 0.65 +0.0 97,555 - H281DRAFT_03065 0.74 +0.1 97,711 + -0.8 97,712 - H281DRAFT_03065 0.87 -0.2 97,924 - +0.2 98,243 - H281DRAFT_03066 0.28 -1.2 98,263 + H281DRAFT_03066 0.30 -1.1 98,782 + H281DRAFT_03066 0.86 +0.5 98,783 - H281DRAFT_03066 0.86 -1.1
Or see this region's nucleotide sequence