Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02870 and H281DRAFT_02871 are separated by 190 nucleotides H281DRAFT_02871 and H281DRAFT_02872 overlap by 4 nucleotides H281DRAFT_02872 and H281DRAFT_02873 are separated by 114 nucleotides
H281DRAFT_02870: H281DRAFT_02870 - Predicted PurR-regulated permease PerM, at 466,305 to 468,254
_02870
H281DRAFT_02871: H281DRAFT_02871 - 3-(3-hydroxy-phenyl)propionate hydroxylase, at 468,445 to 470,217
_02871
H281DRAFT_02872: H281DRAFT_02872 - hypothetical protein, at 470,214 to 470,408
_02872
H281DRAFT_02873: H281DRAFT_02873 - ketopantoate reductase (EC 1.1.1.169), at 470,523 to 471,497
_02873
Position (kb) 468
469
470
471 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 467.572 kb on - strand, within H281DRAFT_02870 at 467.947 kb on - strand, within H281DRAFT_02870 at 467.977 kb on - strand, within H281DRAFT_02870 at 468.044 kb on + strand, within H281DRAFT_02870 at 468.045 kb on - strand, within H281DRAFT_02870 at 468.352 kb on - strand at 468.352 kb on - strand at 468.488 kb on - strand at 468.638 kb on + strand, within H281DRAFT_02871 at 468.758 kb on - strand, within H281DRAFT_02871 at 469.043 kb on + strand, within H281DRAFT_02871 at 469.081 kb on + strand, within H281DRAFT_02871 at 469.082 kb on - strand, within H281DRAFT_02871 at 469.275 kb on - strand, within H281DRAFT_02871 at 469.275 kb on - strand, within H281DRAFT_02871 at 469.378 kb on + strand, within H281DRAFT_02871 at 469.539 kb on + strand, within H281DRAFT_02871 at 469.580 kb on - strand, within H281DRAFT_02871 at 469.717 kb on + strand, within H281DRAFT_02871 at 469.870 kb on - strand, within H281DRAFT_02871 at 470.102 kb on - strand at 470.239 kb on + strand, within H281DRAFT_02872 at 470.239 kb on + strand, within H281DRAFT_02872 at 470.240 kb on - strand, within H281DRAFT_02872 at 470.241 kb on + strand, within H281DRAFT_02872 at 470.242 kb on - strand, within H281DRAFT_02872 at 470.242 kb on - strand, within H281DRAFT_02872 at 470.244 kb on - strand, within H281DRAFT_02872 at 470.244 kb on - strand, within H281DRAFT_02872 at 470.244 kb on - strand, within H281DRAFT_02872 at 470.295 kb on + strand, within H281DRAFT_02872 at 470.406 kb on + strand at 470.407 kb on - strand at 470.407 kb on - strand at 470.495 kb on + strand at 470.496 kb on - strand at 470.496 kb on - strand at 470.496 kb on - strand at 470.497 kb on + strand at 470.498 kb on - strand at 470.527 kb on + strand at 470.581 kb on + strand at 470.665 kb on - strand, within H281DRAFT_02873
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 467,572 - H281DRAFT_02870 0.65 +0.2 467,947 - H281DRAFT_02870 0.84 +0.5 467,977 - H281DRAFT_02870 0.86 -0.5 468,044 + H281DRAFT_02870 0.89 +0.0 468,045 - H281DRAFT_02870 0.89 +0.6 468,352 - -0.7 468,352 - -0.3 468,488 - -0.9 468,638 + H281DRAFT_02871 0.11 +0.0 468,758 - H281DRAFT_02871 0.18 +0.2 469,043 + H281DRAFT_02871 0.34 +0.8 469,081 + H281DRAFT_02871 0.36 -2.0 469,082 - H281DRAFT_02871 0.36 +0.2 469,275 - H281DRAFT_02871 0.47 +0.3 469,275 - H281DRAFT_02871 0.47 +0.9 469,378 + H281DRAFT_02871 0.53 -0.1 469,539 + H281DRAFT_02871 0.62 -0.6 469,580 - H281DRAFT_02871 0.64 -1.0 469,717 + H281DRAFT_02871 0.72 +1.7 469,870 - H281DRAFT_02871 0.80 -2.3 470,102 - -1.4 470,239 + H281DRAFT_02872 0.13 +0.1 470,239 + H281DRAFT_02872 0.13 -1.3 470,240 - H281DRAFT_02872 0.13 +0.4 470,241 + H281DRAFT_02872 0.14 -1.1 470,242 - H281DRAFT_02872 0.14 +0.0 470,242 - H281DRAFT_02872 0.14 -0.2 470,244 - H281DRAFT_02872 0.15 -0.4 470,244 - H281DRAFT_02872 0.15 -0.2 470,244 - H281DRAFT_02872 0.15 +1.2 470,295 + H281DRAFT_02872 0.42 +0.0 470,406 + +1.3 470,407 - +0.9 470,407 - +0.6 470,495 + +0.0 470,496 - +1.1 470,496 - +0.3 470,496 - -2.7 470,497 + -3.1 470,498 - +1.0 470,527 + +0.0 470,581 + -1.2 470,665 - H281DRAFT_02873 0.15 -0.3
Or see this region's nucleotide sequence