Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02495 and H281DRAFT_02496 are separated by 158 nucleotides H281DRAFT_02496 and H281DRAFT_02497 are separated by 56 nucleotides H281DRAFT_02497 and H281DRAFT_02498 are separated by 95 nucleotides
H281DRAFT_02495: H281DRAFT_02495 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 71,940 to 72,971
_02495
H281DRAFT_02496: H281DRAFT_02496 - transcriptional regulator, GntR family, at 73,130 to 73,891
_02496
H281DRAFT_02497: H281DRAFT_02497 - Enoyl-CoA hydratase/carnithine racemase, at 73,948 to 74,679
_02497
H281DRAFT_02498: H281DRAFT_02498 - MFS transporter, putative metabolite:H+ symporter, at 74,775 to 76,175
_02498
Position (kb) 73
74 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 72.217 kb on - strand, within H281DRAFT_02495 at 72.263 kb on - strand, within H281DRAFT_02495 at 72.270 kb on + strand, within H281DRAFT_02495 at 72.270 kb on + strand, within H281DRAFT_02495 at 72.270 kb on + strand, within H281DRAFT_02495 at 72.290 kb on + strand, within H281DRAFT_02495 at 72.382 kb on + strand, within H281DRAFT_02495 at 72.382 kb on + strand, within H281DRAFT_02495 at 72.478 kb on - strand, within H281DRAFT_02495 at 72.478 kb on - strand, within H281DRAFT_02495 at 72.534 kb on - strand, within H281DRAFT_02495 at 72.540 kb on + strand, within H281DRAFT_02495 at 72.950 kb on + strand at 73.131 kb on + strand at 73.132 kb on - strand at 73.404 kb on + strand, within H281DRAFT_02496 at 73.578 kb on + strand, within H281DRAFT_02496 at 73.578 kb on + strand, within H281DRAFT_02496 at 73.578 kb on + strand, within H281DRAFT_02496 at 73.579 kb on - strand, within H281DRAFT_02496 at 73.579 kb on - strand, within H281DRAFT_02496 at 73.990 kb on - strand at 74.112 kb on - strand, within H281DRAFT_02497 at 74.449 kb on - strand, within H281DRAFT_02497 at 74.490 kb on - strand at 74.754 kb on + strand at 74.883 kb on + strand at 74.884 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 72,217 - H281DRAFT_02495 0.27 -0.0 72,263 - H281DRAFT_02495 0.31 -0.7 72,270 + H281DRAFT_02495 0.32 +0.5 72,270 + H281DRAFT_02495 0.32 +2.2 72,270 + H281DRAFT_02495 0.32 -0.7 72,290 + H281DRAFT_02495 0.34 +0.1 72,382 + H281DRAFT_02495 0.43 +1.4 72,382 + H281DRAFT_02495 0.43 +1.2 72,478 - H281DRAFT_02495 0.52 -1.5 72,478 - H281DRAFT_02495 0.52 +0.9 72,534 - H281DRAFT_02495 0.58 +0.9 72,540 + H281DRAFT_02495 0.58 +0.5 72,950 + +0.3 73,131 + -1.3 73,132 - -3.6 73,404 + H281DRAFT_02496 0.36 +0.4 73,578 + H281DRAFT_02496 0.59 -0.9 73,578 + H281DRAFT_02496 0.59 +1.9 73,578 + H281DRAFT_02496 0.59 -0.2 73,579 - H281DRAFT_02496 0.59 +1.6 73,579 - H281DRAFT_02496 0.59 +0.3 73,990 - -0.7 74,112 - H281DRAFT_02497 0.22 -0.7 74,449 - H281DRAFT_02497 0.68 +0.5 74,490 - +0.6 74,754 + -1.0 74,883 + +0.8 74,884 - +0.6
Or see this region's nucleotide sequence