Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02369 and H281DRAFT_02370 are separated by 92 nucleotides H281DRAFT_02370 and H281DRAFT_02371 are separated by 27 nucleotides H281DRAFT_02371 and H281DRAFT_02372 are separated by 242 nucleotides
H281DRAFT_02369: H281DRAFT_02369 - Protein of unknown function (DUF3717), at 531,184 to 531,408
_02369
H281DRAFT_02370: H281DRAFT_02370 - transcriptional regulator, AsnC family, at 531,501 to 531,992
_02370
H281DRAFT_02371: H281DRAFT_02371 - adenylate cyclase, at 532,020 to 532,556
_02371
H281DRAFT_02372: H281DRAFT_02372 - transcriptional regulator, LysR family, at 532,799 to 533,698
_02372
Position (kb) 532
533 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 531.027 kb on + strand at 531.027 kb on + strand at 531.028 kb on - strand at 531.028 kb on - strand at 531.088 kb on - strand at 531.195 kb on - strand at 531.195 kb on - strand at 531.195 kb on - strand at 531.317 kb on + strand, within H281DRAFT_02369 at 531.383 kb on - strand, within H281DRAFT_02369 at 531.394 kb on - strand at 531.394 kb on - strand at 531.399 kb on + strand at 531.399 kb on + strand at 531.407 kb on - strand at 531.476 kb on + strand at 531.476 kb on + strand at 531.477 kb on - strand at 531.477 kb on - strand at 531.479 kb on + strand at 531.498 kb on + strand at 531.499 kb on - strand at 531.499 kb on - strand at 531.505 kb on + strand at 531.505 kb on + strand at 531.505 kb on + strand at 531.506 kb on - strand at 531.506 kb on - strand at 531.506 kb on - strand at 531.542 kb on - strand at 531.542 kb on - strand at 531.707 kb on + strand, within H281DRAFT_02370 at 531.707 kb on + strand, within H281DRAFT_02370 at 531.708 kb on - strand, within H281DRAFT_02370 at 531.820 kb on - strand, within H281DRAFT_02370 at 531.830 kb on + strand, within H281DRAFT_02370 at 531.852 kb on + strand, within H281DRAFT_02370 at 531.852 kb on + strand, within H281DRAFT_02370 at 531.922 kb on + strand, within H281DRAFT_02370 at 531.923 kb on - strand, within H281DRAFT_02370 at 532.066 kb on + strand at 532.237 kb on + strand, within H281DRAFT_02371 at 532.238 kb on - strand, within H281DRAFT_02371 at 532.238 kb on - strand, within H281DRAFT_02371 at 532.238 kb on - strand, within H281DRAFT_02371 at 532.333 kb on + strand, within H281DRAFT_02371 at 532.333 kb on + strand, within H281DRAFT_02371 at 532.336 kb on + strand, within H281DRAFT_02371 at 532.336 kb on + strand, within H281DRAFT_02371 at 532.337 kb on - strand, within H281DRAFT_02371 at 532.372 kb on + strand, within H281DRAFT_02371 at 532.373 kb on - strand, within H281DRAFT_02371 at 532.467 kb on + strand, within H281DRAFT_02371 at 532.468 kb on - strand, within H281DRAFT_02371 at 532.537 kb on - strand at 532.726 kb on - strand at 532.859 kb on - strand at 533.262 kb on + strand, within H281DRAFT_02372 at 533.263 kb on - strand, within H281DRAFT_02372
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 531,027 + -1.0 531,027 + -0.2 531,028 - -2.3 531,028 - +0.2 531,088 - -2.6 531,195 - +0.1 531,195 - +0.0 531,195 - -1.4 531,317 + H281DRAFT_02369 0.59 -0.1 531,383 - H281DRAFT_02369 0.88 -0.7 531,394 - -1.0 531,394 - -1.6 531,399 + +0.3 531,399 + -2.6 531,407 - +1.1 531,476 + -2.3 531,476 + -1.0 531,477 - -0.4 531,477 - -0.8 531,479 + +0.8 531,498 + +0.4 531,499 - +0.4 531,499 - -0.3 531,505 + +1.0 531,505 + +0.6 531,505 + -2.5 531,506 - +0.5 531,506 - +0.0 531,506 - -1.2 531,542 - +0.2 531,542 - +2.0 531,707 + H281DRAFT_02370 0.42 -1.8 531,707 + H281DRAFT_02370 0.42 -0.6 531,708 - H281DRAFT_02370 0.42 -1.2 531,820 - H281DRAFT_02370 0.65 +1.2 531,830 + H281DRAFT_02370 0.67 -2.6 531,852 + H281DRAFT_02370 0.71 -3.5 531,852 + H281DRAFT_02370 0.71 +0.5 531,922 + H281DRAFT_02370 0.86 -0.8 531,923 - H281DRAFT_02370 0.86 +0.7 532,066 + -0.9 532,237 + H281DRAFT_02371 0.40 -0.9 532,238 - H281DRAFT_02371 0.41 +0.0 532,238 - H281DRAFT_02371 0.41 +0.9 532,238 - H281DRAFT_02371 0.41 +0.3 532,333 + H281DRAFT_02371 0.58 +0.4 532,333 + H281DRAFT_02371 0.58 -2.3 532,336 + H281DRAFT_02371 0.59 +0.3 532,336 + H281DRAFT_02371 0.59 +0.5 532,337 - H281DRAFT_02371 0.59 -0.4 532,372 + H281DRAFT_02371 0.66 -0.6 532,373 - H281DRAFT_02371 0.66 +0.3 532,467 + H281DRAFT_02371 0.83 +0.2 532,468 - H281DRAFT_02371 0.83 -0.1 532,537 - +1.9 532,726 - +0.4 532,859 - +0.9 533,262 + H281DRAFT_02372 0.51 -1.0 533,263 - H281DRAFT_02372 0.52 -1.6
Or see this region's nucleotide sequence