Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02168 and H281DRAFT_02169 are separated by 303 nucleotides H281DRAFT_02169 and H281DRAFT_02170 are separated by 109 nucleotides H281DRAFT_02170 and H281DRAFT_02171 are separated by 86 nucleotides
H281DRAFT_02168: H281DRAFT_02168 - ATP-dependent Lon protease, at 308,048 to 309,013
_02168
H281DRAFT_02169: H281DRAFT_02169 - hypothetical protein, at 309,317 to 309,874
_02169
H281DRAFT_02170: H281DRAFT_02170 - Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family, at 309,984 to 310,781
_02170
H281DRAFT_02171: H281DRAFT_02171 - aldose 1-epimerase, at 310,868 to 311,851
_02171
Position (kb) 309
310 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 308.460 kb on + strand, within H281DRAFT_02168 at 308.461 kb on - strand, within H281DRAFT_02168 at 308.481 kb on + strand, within H281DRAFT_02168 at 308.524 kb on + strand, within H281DRAFT_02168 at 308.524 kb on + strand, within H281DRAFT_02168 at 308.538 kb on + strand, within H281DRAFT_02168 at 308.538 kb on + strand, within H281DRAFT_02168 at 308.539 kb on - strand, within H281DRAFT_02168 at 308.539 kb on - strand, within H281DRAFT_02168 at 308.646 kb on + strand, within H281DRAFT_02168 at 308.653 kb on - strand, within H281DRAFT_02168 at 308.905 kb on + strand, within H281DRAFT_02168 at 308.905 kb on + strand, within H281DRAFT_02168 at 308.905 kb on + strand, within H281DRAFT_02168 at 308.905 kb on + strand, within H281DRAFT_02168 at 308.905 kb on + strand, within H281DRAFT_02168 at 308.906 kb on - strand, within H281DRAFT_02168 at 308.906 kb on - strand, within H281DRAFT_02168 at 308.906 kb on - strand, within H281DRAFT_02168 at 308.970 kb on + strand at 308.970 kb on + strand at 308.970 kb on + strand at 308.971 kb on - strand at 308.971 kb on - strand at 308.971 kb on - strand at 309.141 kb on + strand at 309.142 kb on - strand at 309.232 kb on - strand at 309.265 kb on + strand at 309.265 kb on + strand at 309.265 kb on + strand at 309.266 kb on - strand at 309.266 kb on - strand at 309.316 kb on + strand at 309.417 kb on + strand, within H281DRAFT_02169 at 309.508 kb on + strand, within H281DRAFT_02169 at 309.509 kb on - strand, within H281DRAFT_02169 at 309.865 kb on + strand at 309.866 kb on - strand at 309.944 kb on + strand at 309.945 kb on - strand at 309.945 kb on - strand at 310.134 kb on + strand, within H281DRAFT_02170 at 310.553 kb on + strand, within H281DRAFT_02170 at 310.554 kb on - strand, within H281DRAFT_02170 at 310.755 kb on + strand at 310.755 kb on + strand at 310.755 kb on + strand at 310.755 kb on + strand at 310.755 kb on + strand at 310.755 kb on + strand at 310.756 kb on - strand at 310.756 kb on - strand at 310.869 kb on + strand at 310.870 kb on - strand at 310.870 kb on - strand at 310.870 kb on - strand at 310.870 kb on - strand at 310.870 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 308,460 + H281DRAFT_02168 0.43 +1.1 308,461 - H281DRAFT_02168 0.43 -0.3 308,481 + H281DRAFT_02168 0.45 -0.9 308,524 + H281DRAFT_02168 0.49 +0.2 308,524 + H281DRAFT_02168 0.49 -1.0 308,538 + H281DRAFT_02168 0.51 -2.8 308,538 + H281DRAFT_02168 0.51 -0.6 308,539 - H281DRAFT_02168 0.51 -0.1 308,539 - H281DRAFT_02168 0.51 +0.5 308,646 + H281DRAFT_02168 0.62 +0.9 308,653 - H281DRAFT_02168 0.63 +0.1 308,905 + H281DRAFT_02168 0.89 -1.2 308,905 + H281DRAFT_02168 0.89 -3.8 308,905 + H281DRAFT_02168 0.89 +0.1 308,905 + H281DRAFT_02168 0.89 -0.2 308,905 + H281DRAFT_02168 0.89 -2.3 308,906 - H281DRAFT_02168 0.89 -0.2 308,906 - H281DRAFT_02168 0.89 +0.4 308,906 - H281DRAFT_02168 0.89 +0.5 308,970 + -3.6 308,970 + +0.1 308,970 + -1.3 308,971 - -0.3 308,971 - +0.1 308,971 - +0.7 309,141 + +0.1 309,142 - -0.4 309,232 - +0.1 309,265 + -0.4 309,265 + +0.2 309,265 + -0.5 309,266 - +0.1 309,266 - -1.2 309,316 + -0.4 309,417 + H281DRAFT_02169 0.18 -0.7 309,508 + H281DRAFT_02169 0.34 -1.7 309,509 - H281DRAFT_02169 0.34 +0.7 309,865 + -0.7 309,866 - +3.4 309,944 + -3.4 309,945 - +1.5 309,945 - +2.2 310,134 + H281DRAFT_02170 0.19 +2.4 310,553 + H281DRAFT_02170 0.71 -1.3 310,554 - H281DRAFT_02170 0.71 +2.9 310,755 + +2.4 310,755 + +2.8 310,755 + +3.0 310,755 + +2.9 310,755 + +3.2 310,755 + +3.4 310,756 - +3.0 310,756 - +3.0 310,869 + -0.5 310,870 - -0.2 310,870 - +0.1 310,870 - +0.9 310,870 - +0.3 310,870 - +1.9
Or see this region's nucleotide sequence