Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01825

Experiment: 4-Hydroxybenzoic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_01824 and H281DRAFT_01825 are separated by 87 nucleotidesH281DRAFT_01825 and H281DRAFT_01826 are separated by 884 nucleotides H281DRAFT_01824: H281DRAFT_01824 - methyl-accepting chemotaxis sensory transducer with Cache sensor, at 729,080 to 730,639 _01824 H281DRAFT_01825: H281DRAFT_01825 - Outer membrane protein (porin), at 730,727 to 731,869 _01825 H281DRAFT_01826: H281DRAFT_01826 - hypothetical protein, at 732,754 to 732,903 _01826 Position (kb) 730 731 732Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 729.797 kb on - strand, within H281DRAFT_01824at 730.201 kb on + strand, within H281DRAFT_01824at 730.202 kb on - strand, within H281DRAFT_01824at 730.394 kb on - strand, within H281DRAFT_01824at 730.411 kb on - strandat 730.411 kb on - strand, within H281DRAFT_01824at 730.411 kb on - strand, within H281DRAFT_01824at 730.729 kb on - strandat 730.729 kb on - strandat 731.039 kb on - strand, within H281DRAFT_01825at 731.377 kb on - strand, within H281DRAFT_01825at 731.377 kb on - strand, within H281DRAFT_01825at 731.464 kb on - strand, within H281DRAFT_01825at 731.630 kb on - strand, within H281DRAFT_01825at 731.855 kb on - strandat 731.855 kb on - strandat 731.855 kb on - strandat 732.086 kb on - strandat 732.250 kb on + strandat 732.250 kb on + strandat 732.251 kb on - strandat 732.251 kb on - strandat 732.251 kb on - strandat 732.261 kb on + strandat 732.284 kb on + strandat 732.285 kb on - strandat 732.323 kb on + strandat 732.358 kb on - strandat 732.408 kb on + strandat 732.408 kb on + strandat 732.409 kb on - strandat 732.409 kb on - strandat 732.529 kb on + strandat 732.530 kb on - strandat 732.533 kb on + strandat 732.533 kb on + strandat 732.533 kb on + strandat 732.534 kb on - strandat 732.534 kb on - strandat 732.537 kb on + strandat 732.537 kb on + strandat 732.538 kb on - strandat 732.547 kb on + strandat 732.548 kb on - strandat 732.548 kb on - strandat 732.550 kb on + strandat 732.550 kb on + strandat 732.551 kb on - strandat 732.551 kb on - strandat 732.660 kb on + strandat 732.661 kb on - strandat 732.666 kb on - strandat 732.666 kb on - strandat 732.689 kb on + strandat 732.695 kb on + strandat 732.695 kb on + strandat 732.695 kb on + strandat 732.695 kb on + strandat 732.696 kb on - strandat 732.696 kb on - strandat 732.696 kb on - strandat 732.696 kb on - strandat 732.696 kb on - strandat 732.755 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C)
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729,797 - H281DRAFT_01824 0.46 -2.5
730,201 + H281DRAFT_01824 0.72 -1.7
730,202 - H281DRAFT_01824 0.72 -0.7
730,394 - H281DRAFT_01824 0.84 +1.3
730,411 - +1.5
730,411 - H281DRAFT_01824 0.85 -2.1
730,411 - H281DRAFT_01824 0.85 -2.0
730,729 - -3.0
730,729 - -0.7
731,039 - H281DRAFT_01825 0.27 +2.9
731,377 - H281DRAFT_01825 0.57 -2.5
731,377 - H281DRAFT_01825 0.57 -2.5
731,464 - H281DRAFT_01825 0.64 -1.1
731,630 - H281DRAFT_01825 0.79 -2.8
731,855 - -0.1
731,855 - -2.9
731,855 - -1.8
732,086 - -3.7
732,250 + -0.2
732,250 + -0.0
732,251 - -0.6
732,251 - +0.7
732,251 - +0.9
732,261 + -0.3
732,284 + -0.2
732,285 - -1.5
732,323 + -0.9
732,358 - +0.4
732,408 + -1.3
732,408 + -0.9
732,409 - +0.5
732,409 - -0.6
732,529 + +1.0
732,530 - -0.9
732,533 + +2.1
732,533 + +0.8
732,533 + -2.0
732,534 - +0.1
732,534 - -1.3
732,537 + +0.9
732,537 + -0.2
732,538 - -0.3
732,547 + -2.9
732,548 - +0.3
732,548 - -0.4
732,550 + +0.7
732,550 + +0.3
732,551 - -1.0
732,551 - +0.3
732,660 + +0.8
732,661 - -1.0
732,666 - +0.2
732,666 - -0.2
732,689 + +0.7
732,695 + -0.5
732,695 + -2.0
732,695 + +1.5
732,695 + -1.0
732,696 - -0.4
732,696 - -0.6
732,696 - -0.3
732,696 - -0.6
732,696 - +0.2
732,755 + +0.5

Or see this region's nucleotide sequence