Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00851 and H281DRAFT_00852 are separated by 125 nucleotides H281DRAFT_00852 and H281DRAFT_00853 are separated by 201 nucleotides
H281DRAFT_00851: H281DRAFT_00851 - polyhydroxyalkanoate synthase, at 940,356 to 942,116
_00851
H281DRAFT_00852: H281DRAFT_00852 - acetyl-CoA acetyltransferase, at 942,242 to 943,423
_00852
H281DRAFT_00853: H281DRAFT_00853 - 3-oxoacyl-[acyl-carrier-protein] reductase /acetoacetyl-CoA reductase, at 943,625 to 944,365
_00853
Position (kb) 942
943
944 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 941.293 kb on + strand, within H281DRAFT_00851 at 941.405 kb on - strand, within H281DRAFT_00851 at 941.566 kb on - strand, within H281DRAFT_00851 at 941.605 kb on - strand, within H281DRAFT_00851 at 941.643 kb on + strand, within H281DRAFT_00851 at 941.643 kb on + strand, within H281DRAFT_00851 at 941.643 kb on + strand, within H281DRAFT_00851 at 941.643 kb on + strand, within H281DRAFT_00851 at 941.644 kb on - strand, within H281DRAFT_00851 at 941.644 kb on - strand, within H281DRAFT_00851 at 941.644 kb on - strand, within H281DRAFT_00851 at 941.644 kb on - strand, within H281DRAFT_00851 at 941.644 kb on - strand, within H281DRAFT_00851 at 941.644 kb on - strand, within H281DRAFT_00851 at 941.644 kb on - strand, within H281DRAFT_00851 at 941.663 kb on + strand, within H281DRAFT_00851 at 941.663 kb on + strand, within H281DRAFT_00851 at 941.663 kb on + strand, within H281DRAFT_00851 at 941.664 kb on - strand, within H281DRAFT_00851 at 941.668 kb on - strand, within H281DRAFT_00851 at 941.668 kb on - strand, within H281DRAFT_00851 at 941.668 kb on - strand, within H281DRAFT_00851 at 941.705 kb on + strand, within H281DRAFT_00851 at 941.706 kb on - strand, within H281DRAFT_00851 at 941.758 kb on - strand, within H281DRAFT_00851 at 941.758 kb on - strand, within H281DRAFT_00851 at 941.758 kb on - strand, within H281DRAFT_00851 at 941.758 kb on - strand, within H281DRAFT_00851 at 941.778 kb on - strand, within H281DRAFT_00851 at 941.778 kb on - strand, within H281DRAFT_00851 at 941.799 kb on + strand, within H281DRAFT_00851 at 942.696 kb on - strand, within H281DRAFT_00852 at 942.696 kb on - strand, within H281DRAFT_00852 at 942.696 kb on - strand, within H281DRAFT_00852 at 942.696 kb on - strand, within H281DRAFT_00852 at 942.705 kb on - strand, within H281DRAFT_00852 at 943.076 kb on + strand, within H281DRAFT_00852 at 943.222 kb on - strand, within H281DRAFT_00852 at 943.222 kb on - strand, within H281DRAFT_00852 at 943.225 kb on + strand, within H281DRAFT_00852 at 943.225 kb on + strand, within H281DRAFT_00852 at 943.225 kb on + strand at 943.226 kb on - strand, within H281DRAFT_00852 at 943.226 kb on - strand, within H281DRAFT_00852 at 943.378 kb on + strand at 943.378 kb on + strand at 943.379 kb on - strand at 943.510 kb on + strand at 943.510 kb on + strand at 943.644 kb on - strand at 943.644 kb on - strand at 943.644 kb on - strand at 943.647 kb on + strand at 943.648 kb on - strand at 943.707 kb on - strand, within H281DRAFT_00853 at 943.707 kb on - strand, within H281DRAFT_00853
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 941,293 + H281DRAFT_00851 0.53 +1.9 941,405 - H281DRAFT_00851 0.60 -4.7 941,566 - H281DRAFT_00851 0.69 -5.1 941,605 - H281DRAFT_00851 0.71 -2.9 941,643 + H281DRAFT_00851 0.73 +0.9 941,643 + H281DRAFT_00851 0.73 +0.9 941,643 + H281DRAFT_00851 0.73 +0.9 941,643 + H281DRAFT_00851 0.73 +0.8 941,644 - H281DRAFT_00851 0.73 -4.9 941,644 - H281DRAFT_00851 0.73 -1.9 941,644 - H281DRAFT_00851 0.73 -4.9 941,644 - H281DRAFT_00851 0.73 -3.0 941,644 - H281DRAFT_00851 0.73 -3.2 941,644 - H281DRAFT_00851 0.73 -3.2 941,644 - H281DRAFT_00851 0.73 -2.3 941,663 + H281DRAFT_00851 0.74 +1.5 941,663 + H281DRAFT_00851 0.74 +1.4 941,663 + H281DRAFT_00851 0.74 +0.7 941,664 - H281DRAFT_00851 0.74 -2.9 941,668 - H281DRAFT_00851 0.75 -3.9 941,668 - H281DRAFT_00851 0.75 -3.5 941,668 - H281DRAFT_00851 0.75 -4.1 941,705 + H281DRAFT_00851 0.77 +1.3 941,706 - H281DRAFT_00851 0.77 -1.0 941,758 - H281DRAFT_00851 0.80 -5.1 941,758 - H281DRAFT_00851 0.80 -2.2 941,758 - H281DRAFT_00851 0.80 -3.2 941,758 - H281DRAFT_00851 0.80 -3.7 941,778 - H281DRAFT_00851 0.81 -3.5 941,778 - H281DRAFT_00851 0.81 -3.4 941,799 + H281DRAFT_00851 0.82 +1.6 942,696 - H281DRAFT_00852 0.38 -4.2 942,696 - H281DRAFT_00852 0.38 -4.5 942,696 - H281DRAFT_00852 0.38 -4.1 942,696 - H281DRAFT_00852 0.38 -3.9 942,705 - H281DRAFT_00852 0.39 -2.0 943,076 + H281DRAFT_00852 0.71 +1.5 943,222 - H281DRAFT_00852 0.83 -3.9 943,222 - H281DRAFT_00852 0.83 -2.5 943,225 + H281DRAFT_00852 0.83 +1.0 943,225 + H281DRAFT_00852 0.83 +1.8 943,225 + -0.2 943,226 - H281DRAFT_00852 0.83 -3.5 943,226 - H281DRAFT_00852 0.83 -1.6 943,378 + -1.3 943,378 + +0.6 943,379 - -4.3 943,510 + +1.7 943,510 + +1.7 943,644 - -1.8 943,644 - -4.1 943,644 - -5.3 943,647 + -2.1 943,648 - -3.4 943,707 - H281DRAFT_00853 0.11 -3.2 943,707 - H281DRAFT_00853 0.11 -3.2
Or see this region's nucleotide sequence