Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00626 and H281DRAFT_00627 are separated by 581 nucleotides H281DRAFT_00627 and H281DRAFT_00628 are separated by 188 nucleotides H281DRAFT_00628 and H281DRAFT_00629 are separated by 59 nucleotides
H281DRAFT_00626: H281DRAFT_00626 - hypothetical protein, at 702,180 to 703,022
_00626
H281DRAFT_00627: H281DRAFT_00627 - phosphoenolpyruvate synthase, at 703,604 to 706,009
_00627
H281DRAFT_00628: H281DRAFT_00628 - Membrane protein implicated in regulation of membrane protease activity, at 706,198 to 706,653
_00628
H281DRAFT_00629: H281DRAFT_00629 - SPFH domain, Band 7 family protein, at 706,713 to 707,645
_00629
Position (kb) 703
704
705
706
707 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 702.638 kb on - strand, within H281DRAFT_00626 at 703.467 kb on + strand at 703.468 kb on - strand at 703.480 kb on + strand at 703.481 kb on - strand at 703.594 kb on - strand at 703.594 kb on - strand at 703.603 kb on + strand at 703.603 kb on + strand at 703.603 kb on + strand at 703.603 kb on + strand at 703.603 kb on + strand at 703.604 kb on - strand at 703.604 kb on - strand at 703.640 kb on + strand at 703.640 kb on + strand at 703.640 kb on + strand at 703.640 kb on + strand at 703.640 kb on + strand at 703.641 kb on - strand at 703.644 kb on + strand at 703.644 kb on + strand at 703.644 kb on + strand at 703.644 kb on + strand at 703.645 kb on - strand at 703.645 kb on - strand at 703.645 kb on - strand at 703.645 kb on - strand at 704.057 kb on + strand at 704.134 kb on + strand, within H281DRAFT_00627 at 704.291 kb on + strand, within H281DRAFT_00627 at 704.291 kb on + strand, within H281DRAFT_00627 at 704.292 kb on - strand, within H281DRAFT_00627 at 704.292 kb on - strand, within H281DRAFT_00627 at 704.343 kb on - strand, within H281DRAFT_00627 at 704.376 kb on - strand, within H281DRAFT_00627 at 704.552 kb on + strand, within H281DRAFT_00627 at 704.552 kb on + strand, within H281DRAFT_00627 at 705.008 kb on + strand, within H281DRAFT_00627 at 705.008 kb on + strand, within H281DRAFT_00627 at 705.285 kb on - strand, within H281DRAFT_00627 at 705.308 kb on - strand, within H281DRAFT_00627 at 705.308 kb on - strand, within H281DRAFT_00627 at 705.332 kb on + strand, within H281DRAFT_00627 at 705.381 kb on - strand, within H281DRAFT_00627 at 705.568 kb on + strand, within H281DRAFT_00627 at 705.867 kb on - strand at 705.867 kb on - strand at 705.867 kb on - strand at 705.867 kb on - strand at 705.867 kb on - strand at 705.867 kb on - strand at 706.007 kb on + strand at 706.030 kb on + strand at 706.030 kb on + strand at 706.151 kb on - strand at 706.164 kb on + strand at 706.165 kb on - strand at 706.241 kb on + strand at 706.655 kb on - strand at 706.683 kb on + strand at 706.684 kb on - strand at 706.688 kb on + strand at 706.688 kb on + strand at 706.688 kb on + strand at 706.689 kb on - strand at 706.689 kb on - strand at 706.692 kb on + strand at 706.692 kb on + strand at 706.712 kb on + strand at 706.712 kb on + strand at 706.887 kb on + strand, within H281DRAFT_00629 at 706.938 kb on - strand, within H281DRAFT_00629 at 706.952 kb on + strand, within H281DRAFT_00629 at 706.953 kb on - strand, within H281DRAFT_00629 at 706.981 kb on - strand, within H281DRAFT_00629
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 702,638 - H281DRAFT_00626 0.54 -0.8 703,467 + -0.7 703,468 - -2.6 703,480 + +0.6 703,481 - -3.0 703,594 - -4.0 703,594 - -3.9 703,603 + -3.3 703,603 + -3.7 703,603 + -3.7 703,603 + -3.1 703,603 + -2.5 703,604 - -1.9 703,604 - -1.5 703,640 + -4.4 703,640 + -4.5 703,640 + -4.1 703,640 + -3.1 703,640 + -4.0 703,641 - -2.5 703,644 + -3.1 703,644 + -5.5 703,644 + -4.5 703,644 + -3.1 703,645 - -4.1 703,645 - -2.4 703,645 - -3.8 703,645 - -4.1 704,057 + -1.2 704,134 + H281DRAFT_00627 0.22 -3.4 704,291 + H281DRAFT_00627 0.29 -2.1 704,291 + H281DRAFT_00627 0.29 -3.6 704,292 - H281DRAFT_00627 0.29 -3.9 704,292 - H281DRAFT_00627 0.29 -5.7 704,343 - H281DRAFT_00627 0.31 -4.8 704,376 - H281DRAFT_00627 0.32 -2.6 704,552 + H281DRAFT_00627 0.39 -4.8 704,552 + H281DRAFT_00627 0.39 -1.6 705,008 + H281DRAFT_00627 0.58 -2.0 705,008 + H281DRAFT_00627 0.58 -1.3 705,285 - H281DRAFT_00627 0.70 -2.5 705,308 - H281DRAFT_00627 0.71 -3.1 705,308 - H281DRAFT_00627 0.71 -3.3 705,332 + H281DRAFT_00627 0.72 -2.7 705,381 - H281DRAFT_00627 0.74 -3.0 705,568 + H281DRAFT_00627 0.82 -3.7 705,867 - -2.7 705,867 - -4.9 705,867 - -5.2 705,867 - -0.8 705,867 - -0.8 705,867 - -0.6 706,007 + -1.0 706,030 + -1.3 706,030 + -3.0 706,151 - +1.4 706,164 + -1.3 706,165 - +0.9 706,241 + -0.2 706,655 - -0.2 706,683 + +0.4 706,684 - +0.7 706,688 + +0.3 706,688 + -0.8 706,688 + -2.4 706,689 - -2.4 706,689 - +0.8 706,692 + -0.1 706,692 + -0.9 706,712 + -0.8 706,712 + +0.2 706,887 + H281DRAFT_00629 0.19 -0.4 706,938 - H281DRAFT_00629 0.24 +0.6 706,952 + H281DRAFT_00629 0.26 -2.0 706,953 - H281DRAFT_00629 0.26 -0.6 706,981 - H281DRAFT_00629 0.29 -2.0
Or see this region's nucleotide sequence