Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00471 and H281DRAFT_00472 are separated by 179 nucleotides H281DRAFT_00472 and H281DRAFT_00473 are separated by 10 nucleotides
H281DRAFT_00471: H281DRAFT_00471 - transcriptional regulator, IclR family, at 530,591 to 531,403
_00471
H281DRAFT_00472: H281DRAFT_00472 - L-lactate dehydrogenase complex protein LldE, at 531,583 to 532,305
_00472
H281DRAFT_00473: H281DRAFT_00473 - iron-sulfur cluster-binding protein, at 532,316 to 533,731
_00473
Position (kb) 531
532
533 Strain fitness (log2 ratio) -2
-1
0
1
2 at 530.618 kb on - strand at 530.764 kb on - strand, within H281DRAFT_00471 at 530.764 kb on - strand, within H281DRAFT_00471 at 530.764 kb on - strand, within H281DRAFT_00471 at 530.764 kb on - strand, within H281DRAFT_00471 at 530.765 kb on + strand, within H281DRAFT_00471 at 530.766 kb on - strand, within H281DRAFT_00471 at 530.766 kb on - strand, within H281DRAFT_00471 at 530.766 kb on - strand, within H281DRAFT_00471 at 530.768 kb on - strand, within H281DRAFT_00471 at 531.320 kb on - strand, within H281DRAFT_00471 at 531.446 kb on - strand at 531.513 kb on - strand at 531.513 kb on - strand at 531.513 kb on - strand at 531.531 kb on + strand at 531.531 kb on + strand at 531.552 kb on + strand at 531.683 kb on + strand, within H281DRAFT_00472 at 531.684 kb on - strand, within H281DRAFT_00472 at 531.721 kb on + strand, within H281DRAFT_00472 at 531.722 kb on - strand, within H281DRAFT_00472 at 531.793 kb on + strand, within H281DRAFT_00472 at 531.793 kb on + strand, within H281DRAFT_00472 at 531.794 kb on - strand, within H281DRAFT_00472 at 531.983 kb on - strand, within H281DRAFT_00472 at 532.123 kb on + strand, within H281DRAFT_00472 at 532.200 kb on - strand, within H281DRAFT_00472 at 532.224 kb on + strand, within H281DRAFT_00472 at 532.304 kb on - strand at 532.728 kb on - strand, within H281DRAFT_00473 at 532.787 kb on - strand, within H281DRAFT_00473 at 532.787 kb on - strand, within H281DRAFT_00473 at 533.177 kb on + strand, within H281DRAFT_00473 at 533.177 kb on + strand, within H281DRAFT_00473 at 533.177 kb on + strand, within H281DRAFT_00473 at 533.177 kb on + strand, within H281DRAFT_00473 at 533.177 kb on + strand, within H281DRAFT_00473 at 533.177 kb on + strand, within H281DRAFT_00473 at 533.177 kb on + strand, within H281DRAFT_00473 at 533.177 kb on + strand, within H281DRAFT_00473 at 533.177 kb on + strand, within H281DRAFT_00473 at 533.177 kb on + strand, within H281DRAFT_00473 at 533.177 kb on + strand, within H281DRAFT_00473 at 533.177 kb on + strand, within H281DRAFT_00473 at 533.177 kb on + strand, within H281DRAFT_00473 at 533.177 kb on + strand, within H281DRAFT_00473 at 533.178 kb on - strand, within H281DRAFT_00473 at 533.178 kb on - strand, within H281DRAFT_00473 at 533.178 kb on - strand, within H281DRAFT_00473 at 533.178 kb on - strand, within H281DRAFT_00473 at 533.178 kb on - strand, within H281DRAFT_00473 at 533.178 kb on - strand, within H281DRAFT_00473 at 533.178 kb on - strand, within H281DRAFT_00473 at 533.178 kb on - strand, within H281DRAFT_00473 at 533.178 kb on - strand, within H281DRAFT_00473 at 533.178 kb on - strand, within H281DRAFT_00473 at 533.178 kb on - strand, within H281DRAFT_00473 at 533.178 kb on - strand, within H281DRAFT_00473 at 533.178 kb on - strand, within H281DRAFT_00473 at 533.178 kb on - strand, within H281DRAFT_00473 at 533.181 kb on + strand, within H281DRAFT_00473 at 533.181 kb on + strand, within H281DRAFT_00473 at 533.181 kb on + strand, within H281DRAFT_00473 at 533.181 kb on + strand, within H281DRAFT_00473 at 533.181 kb on + strand, within H281DRAFT_00473 at 533.181 kb on + strand, within H281DRAFT_00473 at 533.182 kb on - strand, within H281DRAFT_00473
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 530,618 - +0.3 530,764 - H281DRAFT_00471 0.21 -0.6 530,764 - H281DRAFT_00471 0.21 -0.7 530,764 - H281DRAFT_00471 0.21 +0.2 530,764 - H281DRAFT_00471 0.21 -2.7 530,765 + H281DRAFT_00471 0.21 -2.6 530,766 - H281DRAFT_00471 0.22 -0.9 530,766 - H281DRAFT_00471 0.22 -0.7 530,766 - H281DRAFT_00471 0.22 -1.6 530,768 - H281DRAFT_00471 0.22 +0.7 531,320 - H281DRAFT_00471 0.90 -1.5 531,446 - +0.5 531,513 - +0.3 531,513 - -0.2 531,513 - +0.3 531,531 + -1.0 531,531 + -0.6 531,552 + +0.9 531,683 + H281DRAFT_00472 0.14 -0.0 531,684 - H281DRAFT_00472 0.14 +0.3 531,721 + H281DRAFT_00472 0.19 -1.2 531,722 - H281DRAFT_00472 0.19 +1.7 531,793 + H281DRAFT_00472 0.29 +0.5 531,793 + H281DRAFT_00472 0.29 +0.6 531,794 - H281DRAFT_00472 0.29 +1.5 531,983 - H281DRAFT_00472 0.55 +0.0 532,123 + H281DRAFT_00472 0.75 +0.1 532,200 - H281DRAFT_00472 0.85 +0.1 532,224 + H281DRAFT_00472 0.89 -0.2 532,304 - +1.0 532,728 - H281DRAFT_00473 0.29 +1.2 532,787 - H281DRAFT_00473 0.33 +1.4 532,787 - H281DRAFT_00473 0.33 -1.2 533,177 + H281DRAFT_00473 0.61 +0.8 533,177 + H281DRAFT_00473 0.61 -0.1 533,177 + H281DRAFT_00473 0.61 +1.0 533,177 + H281DRAFT_00473 0.61 +0.8 533,177 + H281DRAFT_00473 0.61 -0.2 533,177 + H281DRAFT_00473 0.61 +1.6 533,177 + H281DRAFT_00473 0.61 +1.8 533,177 + H281DRAFT_00473 0.61 +0.4 533,177 + H281DRAFT_00473 0.61 +2.0 533,177 + H281DRAFT_00473 0.61 +0.8 533,177 + H281DRAFT_00473 0.61 +0.8 533,177 + H281DRAFT_00473 0.61 +0.7 533,177 + H281DRAFT_00473 0.61 +0.3 533,177 + H281DRAFT_00473 0.61 +1.8 533,178 - H281DRAFT_00473 0.61 +0.5 533,178 - H281DRAFT_00473 0.61 +1.1 533,178 - H281DRAFT_00473 0.61 -0.4 533,178 - H281DRAFT_00473 0.61 -0.3 533,178 - H281DRAFT_00473 0.61 -0.4 533,178 - H281DRAFT_00473 0.61 +1.1 533,178 - H281DRAFT_00473 0.61 +0.1 533,178 - H281DRAFT_00473 0.61 +0.0 533,178 - H281DRAFT_00473 0.61 +1.3 533,178 - H281DRAFT_00473 0.61 -0.4 533,178 - H281DRAFT_00473 0.61 -2.5 533,178 - H281DRAFT_00473 0.61 +0.1 533,178 - H281DRAFT_00473 0.61 -0.6 533,178 - H281DRAFT_00473 0.61 +1.4 533,181 + H281DRAFT_00473 0.61 -0.5 533,181 + H281DRAFT_00473 0.61 +1.2 533,181 + H281DRAFT_00473 0.61 -2.7 533,181 + H281DRAFT_00473 0.61 +1.5 533,181 + H281DRAFT_00473 0.61 +0.8 533,181 + H281DRAFT_00473 0.61 +0.6 533,182 - H281DRAFT_00473 0.61 -0.0
Or see this region's nucleotide sequence