Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22100

Experiment: m.b. benzoic 0.145 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. benzoic 0.145 mg/ml
2,289,535	-		PGA1_c22080	0.88	+0.1
2,289,592	-				-2.1
2,289,592	-				-1.1
2,289,694	-				+0.9
2,289,721	+				+0.3
2,289,729	-				-0.9
2,289,798	+		PGA1_c22090	0.11	-1.2
2,289,820	+		PGA1_c22090	0.14	+1.5
2,289,820	+		PGA1_c22090	0.14	-0.4
2,289,830	+		PGA1_c22090	0.16	+0.3
2,289,849	-		PGA1_c22090	0.19	+0.0
2,289,880	-		PGA1_c22090	0.23	+0.3
2,289,882	+		PGA1_c22090	0.24	+0.3
2,289,882	+		PGA1_c22090	0.24	-2.3
2,289,882	+		PGA1_c22090	0.24	+0.9
2,289,882	+		PGA1_c22090	0.24	-0.9
2,289,882	+		PGA1_c22090	0.24	-1.3
2,289,882	+		PGA1_c22090	0.24	+0.5
2,289,890	-		PGA1_c22090	0.25	+0.2
2,289,890	-		PGA1_c22090	0.25	-1.3
2,289,890	-		PGA1_c22090	0.25	+1.3
2,289,955	+		PGA1_c22090	0.34	-0.7
2,289,955	+		PGA1_c22090	0.34	+0.5
2,290,013	-		PGA1_c22090	0.43	+0.5
2,290,023	+		PGA1_c22090	0.44	-0.3
2,290,029	+		PGA1_c22090	0.45	+0.9
2,290,061	+		PGA1_c22090	0.50	+0.8
2,290,093	-		PGA1_c22090	0.55	+0.5
2,290,103	-		PGA1_c22090	0.56	+1.5
2,290,112	+		PGA1_c22090	0.58	+0.4
2,290,117	+		PGA1_c22090	0.58	-0.1
2,290,125	-		PGA1_c22090	0.60	-0.3
2,290,125	-		PGA1_c22090	0.60	-0.6
2,290,127	+		PGA1_c22090	0.60	-1.1
2,290,127	+		PGA1_c22090	0.60	-1.8
2,290,127	+		PGA1_c22090	0.60	-0.5
2,290,127	+		PGA1_c22090	0.60	-1.5
2,290,135	-		PGA1_c22090	0.61	-0.1
2,290,135	-		PGA1_c22090	0.61	-0.7
2,290,135	-		PGA1_c22090	0.61	-1.1
2,290,135	-		PGA1_c22090	0.61	+1.2
2,290,135	-		PGA1_c22090	0.61	+0.1
2,290,135	-		PGA1_c22090	0.61	-2.3
2,290,135	-		PGA1_c22090	0.61	+0.3
2,290,135	-		PGA1_c22090	0.61	+0.1
2,290,135	-		PGA1_c22090	0.61	+0.5
2,290,135	-		PGA1_c22090	0.61	-0.4
2,290,199	-		PGA1_c22090	0.71	+1.1
2,290,271	-		PGA1_c22090	0.81	-0.1
2,290,307	+		PGA1_c22090	0.87	-0.3
2,290,307	+		PGA1_c22090	0.87	-0.5
2,290,307	+		PGA1_c22090	0.87	-1.1
2,290,307	+		PGA1_c22090	0.87	-0.6
2,290,312	+		PGA1_c22090	0.88	-0.5
2,290,315	-		PGA1_c22090	0.88	+0.6
2,290,315	-		PGA1_c22090	0.88	-0.7
2,290,315	-		PGA1_c22090	0.88	+2.1
2,290,315	-		PGA1_c22090	0.88	-0.8
2,290,344	+				-0.3
2,290,344	+				+0.3
2,290,372	-				-0.0
2,290,393	-				+1.4
2,290,410	+				+0.1
2,290,439	-				+0.5
2,290,439	-				-0.7
2,290,521	-		PGA1_c22100	0.22	-0.4
2,290,526	-		PGA1_c22100	0.23	-0.8
2,290,558	-		PGA1_c22100	0.30	+1.0
2,290,716	+		PGA1_c22100	0.65	+1.9
2,290,716	+		PGA1_c22100	0.65	-0.1
2,290,716	+		PGA1_c22100	0.65	+0.2
2,290,716	+		PGA1_c22100	0.65	+1.0
2,290,721	+		PGA1_c22100	0.66	+0.7
2,290,724	-		PGA1_c22100	0.67	+1.7
2,290,724	-		PGA1_c22100	0.67	-1.1
2,290,724	-		PGA1_c22100	0.67	+0.9
2,290,729	-		PGA1_c22100	0.68	+0.7
2,290,740	+		PGA1_c22100	0.71	+1.5
2,290,767	+		PGA1_c22100	0.77	+0.5
2,290,817	+		PGA1_c22100	0.88	-0.3
2,290,865	-				+0.7
2,290,905	+				-1.9
2,290,913	-				+0.1
2,290,913	-				+0.4
2,291,002	+				-1.8
2,291,043	+				-0.0
2,291,050	+				+0.5
2,291,051	-				-0.5
2,291,139	+				+0.9
2,291,199	-				-1.0
2,291,241	-				+0.1
2,291,260	-				-0.6
2,291,301	-				+0.7
2,291,314	-				-1.6
2,291,314	-				-1.0
2,291,413	+				+0.8
2,291,429	+				-1.1
2,291,437	-				-1.6
2,291,437	-				+0.1
2,291,437	-				+0.4
2,291,464	-				-1.1
2,291,582	+		PGA1_c22110	0.16	-1.7
2,291,619	-		PGA1_c22110	0.18	+0.9
2,291,665	+		PGA1_c22110	0.21	-0.6
2,291,665	+		PGA1_c22110	0.21	+0.1
2,291,716	+		PGA1_c22110	0.25	-0.5
2,291,740	-		PGA1_c22110	0.26	-0.3
2,291,809	+		PGA1_c22110	0.30	-0.3
2,291,815	+		PGA1_c22110	0.31	+1.3
2,291,835	+		PGA1_c22110	0.32	+0.5