Strain Fitness in Dechlorosoma suillum PS around Dsui_3395
Experiment: ALP with Bacitracin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Bacitracin 0.2 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,640,537 | + | Dsui_3394 | 0.71 | -2.6 | |
3,640,783 | - | Dsui_3394 | 0.80 | -0.2 | |
3,640,793 | - | +1.2 | |||
3,640,845 | + | Dsui_3394 | 0.82 | +0.2 | |
3,640,976 | + | +0.2 | |||
3,641,042 | + | Dsui_3394 | 0.89 | -1.3 | |
3,641,063 | - | -1.3 | |||
3,641,095 | - | -0.6 | |||
3,641,173 | + | +0.2 | |||
3,641,190 | + | -1.3 | |||
3,641,272 | + | +0.2 | |||
3,641,358 | + | +0.2 | |||
3,641,366 | - | -1.8 | |||
3,641,371 | + | -1.8 | |||
3,641,380 | - | +0.2 | |||
3,641,630 | + | +0.2 | |||
3,641,696 | - | +0.2 | |||
3,641,713 | + | -1.3 | |||
3,641,747 | - | +0.2 | |||
3,641,945 | + | +0.2 | |||
3,642,003 | + | +0.2 | |||
3,642,021 | - | -0.8 | |||
3,642,261 | + | +0.2 | |||
3,642,307 | + | +0.2 | |||
3,642,376 | - | +0.2 | |||
3,642,386 | - | Dsui_3395 | 0.82 | -0.8 | |
3,642,573 | - | -2.8 | |||
3,642,628 | + | +0.2 | |||
3,642,648 | + | -2.3 | |||
3,642,656 | - | -1.3 | |||
3,642,770 | - | +0.2 | |||
3,642,888 | + | Dsui_3396 | 0.17 | -1.6 | |
3,642,949 | + | +0.2 | |||
3,643,011 | + | +1.2 | |||
3,643,036 | - | +0.2 | |||
3,643,103 | + | Dsui_3396 | 0.42 | -3.2 | |
3,643,261 | + | Dsui_3396 | 0.60 | -0.8 | |
3,643,262 | + | Dsui_3396 | 0.60 | -0.2 | |
3,643,361 | + | Dsui_3396 | 0.71 | -0.8 |
Or see this region's nucleotide sequence