Experiment: ALP with Bacitracin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3255 and Dsui_3256 are separated by 35 nucleotides Dsui_3256 and Dsui_3257 overlap by 11 nucleotides Dsui_3257 and Dsui_3258 are separated by 2 nucleotides Dsui_3258 and Dsui_3259 are separated by 138 nucleotides
Dsui_3255: Dsui_3255 - integral membrane protein MviN, at 3,494,366 to 3,495,910
_3255
Dsui_3256: Dsui_3256 - Raf kinase inhibitor-like protein, YbhB/YbcL family, at 3,495,946 to 3,496,575
_3256
Dsui_3257: Dsui_3257 - bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities, at 3,496,565 to 3,497,710
_3257
Dsui_3258: Dsui_3258 - mannose-6-phosphate isomerase, at 3,497,713 to 3,498,105
_3258
Dsui_3259: Dsui_3259 - dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein, at 3,498,244 to 3,499,014
_3259
Position (kb)
3496
3497
3498 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3495.972 kb on - strand at 3496.018 kb on + strand, within Dsui_3256 at 3496.040 kb on + strand, within Dsui_3256 at 3496.060 kb on - strand at 3496.062 kb on + strand, within Dsui_3256 at 3496.102 kb on - strand, within Dsui_3256 at 3496.112 kb on - strand, within Dsui_3256 at 3496.197 kb on - strand, within Dsui_3256 at 3496.230 kb on - strand, within Dsui_3256 at 3496.270 kb on + strand, within Dsui_3256 at 3496.368 kb on + strand, within Dsui_3256 at 3496.577 kb on - strand at 3496.600 kb on - strand at 3496.603 kb on + strand at 3496.617 kb on - strand at 3496.714 kb on + strand, within Dsui_3257 at 3496.722 kb on - strand, within Dsui_3257 at 3496.724 kb on + strand, within Dsui_3257 at 3496.783 kb on - strand, within Dsui_3257 at 3496.812 kb on - strand, within Dsui_3257 at 3496.843 kb on - strand, within Dsui_3257 at 3496.911 kb on - strand at 3496.980 kb on + strand at 3496.985 kb on + strand at 3496.988 kb on - strand, within Dsui_3257 at 3497.034 kb on - strand, within Dsui_3257 at 3497.063 kb on + strand, within Dsui_3257 at 3497.126 kb on + strand, within Dsui_3257 at 3497.138 kb on - strand, within Dsui_3257 at 3497.160 kb on - strand, within Dsui_3257 at 3497.290 kb on + strand at 3497.290 kb on + strand at 3497.290 kb on + strand, within Dsui_3257 at 3497.314 kb on + strand at 3497.356 kb on - strand, within Dsui_3257 at 3497.363 kb on - strand, within Dsui_3257 at 3497.397 kb on - strand, within Dsui_3257 at 3497.397 kb on - strand, within Dsui_3257 at 3497.412 kb on - strand, within Dsui_3257 at 3497.427 kb on - strand, within Dsui_3257 at 3497.574 kb on + strand, within Dsui_3257 at 3497.665 kb on - strand at 3497.712 kb on + strand at 3497.785 kb on - strand, within Dsui_3258 at 3497.802 kb on + strand, within Dsui_3258 at 3497.810 kb on - strand, within Dsui_3258 at 3497.823 kb on - strand, within Dsui_3258 at 3497.923 kb on - strand, within Dsui_3258 at 3497.955 kb on - strand, within Dsui_3258 at 3498.106 kb on - strand at 3498.145 kb on + strand at 3498.247 kb on + strand at 3498.332 kb on + strand, within Dsui_3259 at 3498.517 kb on + strand, within Dsui_3259 at 3498.522 kb on - strand at 3498.552 kb on - strand at 3498.696 kb on - strand, within Dsui_3259
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Bacitracin 0.2 mg/ml remove 3,495,972 - +0.2 3,496,018 + Dsui_3256 0.11 -0.3 3,496,040 + Dsui_3256 0.15 -1.1 3,496,060 - -0.8 3,496,062 + Dsui_3256 0.18 -0.4 3,496,102 - Dsui_3256 0.25 -2.4 3,496,112 - Dsui_3256 0.26 +0.2 3,496,197 - Dsui_3256 0.40 +0.2 3,496,230 - Dsui_3256 0.45 -1.8 3,496,270 + Dsui_3256 0.51 -1.5 3,496,368 + Dsui_3256 0.67 -1.4 3,496,577 - -2.1 3,496,600 - -0.8 3,496,603 + -0.8 3,496,617 - -0.8 3,496,714 + Dsui_3257 0.13 -1.4 3,496,722 - Dsui_3257 0.14 +0.2 3,496,724 + Dsui_3257 0.14 -1.8 3,496,783 - Dsui_3257 0.19 -2.4 3,496,812 - Dsui_3257 0.22 -2.6 3,496,843 - Dsui_3257 0.24 -2.6 3,496,911 - +0.2 3,496,980 + -1.4 3,496,985 + -1.4 3,496,988 - Dsui_3257 0.37 -1.4 3,497,034 - Dsui_3257 0.41 -2.4 3,497,063 + Dsui_3257 0.43 +0.2 3,497,126 + Dsui_3257 0.49 -0.8 3,497,138 - Dsui_3257 0.50 -2.6 3,497,160 - Dsui_3257 0.52 -2.8 3,497,290 + +0.2 3,497,290 + +0.2 3,497,290 + Dsui_3257 0.63 +0.2 3,497,314 + -0.8 3,497,356 - Dsui_3257 0.69 +0.2 3,497,363 - Dsui_3257 0.70 -2.6 3,497,397 - Dsui_3257 0.73 -0.4 3,497,397 - Dsui_3257 0.73 -2.1 3,497,412 - Dsui_3257 0.74 +0.2 3,497,427 - Dsui_3257 0.75 -0.8 3,497,574 + Dsui_3257 0.88 -1.8 3,497,665 - -0.8 3,497,712 + -2.1 3,497,785 - Dsui_3258 0.18 -1.8 3,497,802 + Dsui_3258 0.23 +0.2 3,497,810 - Dsui_3258 0.25 -1.1 3,497,823 - Dsui_3258 0.28 -1.8 3,497,923 - Dsui_3258 0.53 -1.4 3,497,955 - Dsui_3258 0.62 +0.2 3,498,106 - -2.1 3,498,145 + +0.2 3,498,247 + -0.8 3,498,332 + Dsui_3259 0.11 -0.8 3,498,517 + Dsui_3259 0.35 -0.8 3,498,522 - +0.2 3,498,552 - +0.2 3,498,696 - Dsui_3259 0.59 -1.4
Or see this region's nucleotide sequence