Strain Fitness in Dechlorosoma suillum PS around Dsui_3053

Experiment: ALP with Bacitracin 0.2 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3052 and Dsui_3053 are separated by 228 nucleotidesDsui_3053 and Dsui_3054 are separated by 69 nucleotides Dsui_3052: Dsui_3052 - triosephosphate isomerase, at 3,266,760 to 3,267,485 _3052 Dsui_3053: Dsui_3053 - phosphate ABC transporter, ATP-binding protein, at 3,267,714 to 3,268,490 _3053 Dsui_3054: Dsui_3054 - phosphate ABC transporter, permease protein PstA, at 3,268,560 to 3,269,498 _3054 Position (kb) 3267 3268 3269Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 3267.529 kb on - strandat 3267.546 kb on - strandat 3267.546 kb on - strandat 3267.546 kb on - strandat 3267.546 kb on - strandat 3267.561 kb on - strandat 3267.610 kb on - strandat 3267.621 kb on + strandat 3268.515 kb on + strandat 3268.523 kb on - strandat 3268.543 kb on - strandat 3268.543 kb on - strandat 3268.625 kb on - strandat 3268.726 kb on - strand, within Dsui_3054at 3268.896 kb on - strand, within Dsui_3054at 3269.035 kb on - strand, within Dsui_3054

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Bacitracin 0.2 mg/ml
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3,267,529 - -0.2
3,267,546 - +0.2
3,267,546 - +0.3
3,267,546 - +0.1
3,267,546 - +0.3
3,267,561 - +0.5
3,267,610 - +0.2
3,267,621 + -0.8
3,268,515 + +0.2
3,268,523 - -0.2
3,268,543 - +0.1
3,268,543 - -0.3
3,268,625 - -1.7
3,268,726 - Dsui_3054 0.18 -3.8
3,268,896 - Dsui_3054 0.36 -2.5
3,269,035 - Dsui_3054 0.51 -3.8

Or see this region's nucleotide sequence