Experiment: ALP with Bacitracin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2922 and Dsui_2923 are separated by 199 nucleotides Dsui_2923 and Dsui_2924 are separated by 12 nucleotides
Dsui_2922: Dsui_2922 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase, at 3,123,694 to 3,125,469
_2922
Dsui_2923: Dsui_2923 - esterase/lipase, at 3,125,669 to 3,126,511
_2923
Dsui_2924: Dsui_2924 - hypothetical protein, at 3,126,524 to 3,127,285
_2924
Position (kb)
3125
3126
3127 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3124.812 kb on + strand, within Dsui_2922 at 3124.859 kb on + strand, within Dsui_2922 at 3124.884 kb on + strand, within Dsui_2922 at 3124.947 kb on + strand, within Dsui_2922 at 3125.057 kb on - strand at 3125.067 kb on - strand at 3125.441 kb on - strand at 3125.599 kb on + strand at 3125.607 kb on - strand at 3125.808 kb on + strand, within Dsui_2923 at 3125.808 kb on + strand, within Dsui_2923 at 3125.814 kb on - strand at 3125.816 kb on - strand at 3125.816 kb on - strand at 3125.949 kb on + strand, within Dsui_2923 at 3126.057 kb on + strand, within Dsui_2923 at 3126.086 kb on + strand, within Dsui_2923 at 3126.094 kb on - strand at 3126.097 kb on + strand, within Dsui_2923 at 3126.097 kb on + strand, within Dsui_2923 at 3126.123 kb on + strand, within Dsui_2923 at 3126.201 kb on + strand at 3126.209 kb on - strand at 3126.290 kb on - strand, within Dsui_2923 at 3126.341 kb on - strand at 3126.360 kb on + strand, within Dsui_2923 at 3126.405 kb on + strand, within Dsui_2923 at 3126.411 kb on - strand, within Dsui_2923 at 3126.411 kb on - strand, within Dsui_2923 at 3126.474 kb on - strand at 3126.494 kb on - strand at 3126.619 kb on - strand, within Dsui_2924 at 3126.775 kb on - strand at 3126.942 kb on - strand, within Dsui_2924 at 3127.041 kb on + strand, within Dsui_2924
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Bacitracin 0.2 mg/ml remove 3,124,812 + Dsui_2922 0.63 -2.5 3,124,859 + Dsui_2922 0.66 -0.3 3,124,884 + Dsui_2922 0.67 -0.7 3,124,947 + Dsui_2922 0.71 +0.9 3,125,057 - -0.7 3,125,067 - +0.3 3,125,441 - +0.3 3,125,599 + +0.3 3,125,607 - -0.7 3,125,808 + Dsui_2923 0.16 -0.7 3,125,808 + Dsui_2923 0.16 -0.6 3,125,814 - +0.3 3,125,816 - -0.7 3,125,816 - -1.3 3,125,949 + Dsui_2923 0.33 -0.3 3,126,057 + Dsui_2923 0.46 -0.8 3,126,086 + Dsui_2923 0.49 -0.1 3,126,094 - -1.3 3,126,097 + Dsui_2923 0.51 -0.6 3,126,097 + Dsui_2923 0.51 -1.3 3,126,123 + Dsui_2923 0.54 -0.4 3,126,201 + -2.3 3,126,209 - +0.3 3,126,290 - Dsui_2923 0.74 -3.2 3,126,341 - +0.3 3,126,360 + Dsui_2923 0.82 -2.9 3,126,405 + Dsui_2923 0.87 -0.4 3,126,411 - Dsui_2923 0.88 +0.3 3,126,411 - Dsui_2923 0.88 +0.3 3,126,474 - +0.3 3,126,494 - +0.3 3,126,619 - Dsui_2924 0.12 +0.3 3,126,775 - -0.7 3,126,942 - Dsui_2924 0.55 -0.7 3,127,041 + Dsui_2924 0.68 -2.3
Or see this region's nucleotide sequence