Experiment: ALP with Bacitracin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2782 and Dsui_2783 are separated by 40 nucleotides Dsui_2783 and Dsui_2784 are separated by 871 nucleotides
Dsui_2782: Dsui_2782 - response regulator containing a CheY-like receiver domain and an HD-GYP domain, at 2,949,123 to 2,950,247
_2782
Dsui_2783: Dsui_2783 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 2,950,288 to 2,951,418
_2783
Dsui_2784: Dsui_2784 - hypothetical protein, at 2,952,290 to 2,952,892
_2784
Position (kb)
2950
2951
2952 Strain fitness (log2 ratio)
-2
-1
0
1 at 2949.342 kb on - strand at 2949.696 kb on + strand, within Dsui_2782 at 2949.721 kb on + strand, within Dsui_2782 at 2949.778 kb on - strand, within Dsui_2782 at 2950.142 kb on - strand at 2950.214 kb on - strand at 2950.403 kb on + strand at 2950.480 kb on - strand, within Dsui_2783 at 2950.501 kb on - strand, within Dsui_2783 at 2950.676 kb on + strand at 2951.153 kb on - strand at 2951.153 kb on - strand, within Dsui_2783 at 2951.156 kb on - strand, within Dsui_2783 at 2951.201 kb on - strand, within Dsui_2783 at 2951.280 kb on + strand, within Dsui_2783 at 2951.392 kb on + strand at 2951.392 kb on + strand at 2951.392 kb on + strand at 2951.392 kb on + strand at 2951.400 kb on - strand at 2951.415 kb on + strand at 2951.457 kb on - strand at 2951.526 kb on - strand at 2951.584 kb on + strand at 2951.646 kb on - strand at 2951.721 kb on + strand at 2951.736 kb on + strand at 2951.744 kb on - strand at 2951.793 kb on - strand at 2951.916 kb on - strand at 2952.003 kb on - strand at 2952.107 kb on - strand at 2952.174 kb on - strand at 2952.188 kb on - strand at 2952.249 kb on - strand at 2952.277 kb on - strand at 2952.356 kb on - strand, within Dsui_2784 at 2952.356 kb on - strand, within Dsui_2784 at 2952.357 kb on - strand, within Dsui_2784 at 2952.367 kb on - strand, within Dsui_2784 at 2952.367 kb on - strand, within Dsui_2784 at 2952.367 kb on - strand at 2952.383 kb on + strand, within Dsui_2784 at 2952.389 kb on - strand at 2952.406 kb on + strand, within Dsui_2784 at 2952.406 kb on + strand, within Dsui_2784 at 2952.414 kb on - strand, within Dsui_2784
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Bacitracin 0.2 mg/ml remove 2,949,342 - +1.4 2,949,696 + Dsui_2782 0.51 -0.6 2,949,721 + Dsui_2782 0.53 +0.4 2,949,778 - Dsui_2782 0.58 +0.4 2,950,142 - -1.6 2,950,214 - -1.2 2,950,403 + -1.2 2,950,480 - Dsui_2783 0.17 +0.4 2,950,501 - Dsui_2783 0.19 +0.4 2,950,676 + +0.4 2,951,153 - +0.4 2,951,153 - Dsui_2783 0.76 -1.6 2,951,156 - Dsui_2783 0.77 -0.6 2,951,201 - Dsui_2783 0.81 -1.2 2,951,280 + Dsui_2783 0.88 -2.2 2,951,392 + -2.4 2,951,392 + -1.2 2,951,392 + -2.6 2,951,392 + -1.2 2,951,400 - -2.6 2,951,415 + +0.4 2,951,457 - -1.2 2,951,526 - +0.4 2,951,584 + +0.4 2,951,646 - +0.4 2,951,721 + -0.6 2,951,736 + +0.4 2,951,744 - +0.4 2,951,793 - -0.6 2,951,916 - +0.4 2,952,003 - -1.2 2,952,107 - -0.6 2,952,174 - -1.2 2,952,188 - +0.4 2,952,249 - +0.4 2,952,277 - +0.4 2,952,356 - Dsui_2784 0.11 +0.4 2,952,356 - Dsui_2784 0.11 -0.6 2,952,357 - Dsui_2784 0.11 -2.2 2,952,367 - Dsui_2784 0.13 -1.2 2,952,367 - Dsui_2784 0.13 +0.4 2,952,367 - -0.6 2,952,383 + Dsui_2784 0.15 +0.2 2,952,389 - +0.4 2,952,406 + Dsui_2784 0.19 -0.6 2,952,406 + Dsui_2784 0.19 +0.4 2,952,414 - Dsui_2784 0.21 -0.6
Or see this region's nucleotide sequence