Experiment: ALP with Bacitracin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2470 and Dsui_2471 are separated by 0 nucleotides Dsui_2471 and Dsui_2472 are separated by 81 nucleotides Dsui_2472 and Dsui_2473 are separated by 52 nucleotides Dsui_2473 and Dsui_2474 are separated by 16 nucleotides Dsui_2474 and Dsui_2475 are separated by 48 nucleotides Dsui_2475 and Dsui_2476 are separated by 138 nucleotides Dsui_2476 and Dsui_2477 are separated by 70 nucleotides
Dsui_2470: Dsui_2470 - excinuclease ABC, C subunit, at 2,626,359 to 2,628,209
_2470
Dsui_2471: Dsui_2471 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 2,628,210 to 2,628,785
_2471
Dsui_2472: Dsui_2472 - tRNA-Gly, at 2,628,867 to 2,628,942
_2472
Dsui_2473: Dsui_2473 - tRNA-Cys, at 2,628,995 to 2,629,068
_2473
Dsui_2474: Dsui_2474 - tRNA-Gly, at 2,629,085 to 2,629,160
_2474
Dsui_2475: Dsui_2475 - tRNA-Gly, at 2,629,209 to 2,629,284
_2475
Dsui_2476: Dsui_2476 - hypothetical protein, at 2,629,423 to 2,629,626
_2476
Dsui_2477: Dsui_2477 - tRNA-Leu, at 2,629,697 to 2,629,781
_2477
Position (kb)
2628
2629 Strain fitness (log2 ratio)
-2
-1
0
1 at 2627.225 kb on + strand, within Dsui_2470 at 2627.306 kb on + strand, within Dsui_2470 at 2627.438 kb on + strand, within Dsui_2470 at 2627.484 kb on + strand, within Dsui_2470 at 2627.541 kb on + strand, within Dsui_2470 at 2627.578 kb on + strand, within Dsui_2470 at 2627.704 kb on + strand, within Dsui_2470 at 2627.753 kb on + strand, within Dsui_2470 at 2627.772 kb on + strand, within Dsui_2470 at 2627.838 kb on + strand, within Dsui_2470 at 2627.882 kb on + strand, within Dsui_2470 at 2627.882 kb on + strand, within Dsui_2470 at 2627.901 kb on + strand, within Dsui_2470 at 2627.928 kb on - strand at 2627.957 kb on - strand, within Dsui_2470 at 2627.986 kb on + strand, within Dsui_2470 at 2628.090 kb on + strand at 2628.114 kb on + strand at 2628.135 kb on + strand at 2628.799 kb on + strand at 2628.800 kb on + strand at 2628.802 kb on - strand at 2628.807 kb on - strand at 2629.161 kb on + strand at 2629.175 kb on + strand at 2629.328 kb on + strand at 2629.394 kb on - strand at 2629.490 kb on + strand, within Dsui_2476 at 2629.653 kb on + strand at 2629.779 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Bacitracin 0.2 mg/ml remove 2,627,225 + Dsui_2470 0.47 -1.9 2,627,306 + Dsui_2470 0.51 -0.2 2,627,438 + Dsui_2470 0.58 -1.0 2,627,484 + Dsui_2470 0.61 -0.8 2,627,541 + Dsui_2470 0.64 -1.5 2,627,578 + Dsui_2470 0.66 -0.7 2,627,704 + Dsui_2470 0.73 -2.3 2,627,753 + Dsui_2470 0.75 -0.6 2,627,772 + Dsui_2470 0.76 -2.3 2,627,838 + Dsui_2470 0.80 +0.0 2,627,882 + Dsui_2470 0.82 +0.3 2,627,882 + Dsui_2470 0.82 -1.7 2,627,901 + Dsui_2470 0.83 -1.3 2,627,928 - -0.7 2,627,957 - Dsui_2470 0.86 +0.3 2,627,986 + Dsui_2470 0.88 -0.3 2,628,090 + -0.5 2,628,114 + -0.2 2,628,135 + -0.5 2,628,799 + -0.1 2,628,800 + -0.3 2,628,802 - -2.0 2,628,807 - +0.3 2,629,161 + -0.2 2,629,175 + -0.2 2,629,328 + -2.0 2,629,394 - +0.3 2,629,490 + Dsui_2476 0.33 -1.7 2,629,653 + -2.3 2,629,779 + -0.1
Or see this region's nucleotide sequence