Experiment: ALP with Bacitracin 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2244 and Dsui_2245 are separated by 187 nucleotides Dsui_2245 and Dsui_2246 are separated by 11 nucleotides Dsui_2246 and Dsui_2247 are separated by 9 nucleotides Dsui_2247 and Dsui_2248 are separated by 40 nucleotides
Dsui_2244: Dsui_2244 - DNA mismatch repair protein MutS, at 2,390,804 to 2,393,407
_2244
Dsui_2245: Dsui_2245 - protein of unknown function (DUF1924), at 2,393,595 to 2,394,017
_2245
Dsui_2246: Dsui_2246 - Diheme cytochrome c, at 2,394,029 to 2,394,508
_2246
Dsui_2247: Dsui_2247 - cytochrome b, at 2,394,518 to 2,395,177
_2247
Dsui_2248: Dsui_2248 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 2,395,218 to 2,395,895
_2248
Position (kb)
2394
2395 Strain fitness (log2 ratio)
-2
-1
0
1 at 2393.232 kb on - strand at 2393.232 kb on - strand at 2393.232 kb on - strand at 2393.244 kb on + strand at 2393.337 kb on - strand at 2393.354 kb on - strand at 2393.411 kb on - strand at 2393.412 kb on - strand at 2393.519 kb on + strand at 2393.685 kb on + strand at 2393.775 kb on + strand at 2393.783 kb on - strand at 2393.783 kb on - strand at 2394.067 kb on - strand at 2394.180 kb on + strand at 2394.188 kb on - strand at 2394.200 kb on - strand at 2394.277 kb on - strand at 2394.312 kb on + strand, within Dsui_2246 at 2394.438 kb on - strand at 2394.628 kb on - strand at 2394.993 kb on - strand, within Dsui_2247 at 2395.084 kb on - strand at 2395.194 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Bacitracin 0.2 mg/ml remove 2,393,232 - -0.0 2,393,232 - +0.0 2,393,232 - -0.5 2,393,244 + +0.5 2,393,337 - -1.0 2,393,354 - -1.5 2,393,411 - -0.5 2,393,412 - -1.1 2,393,519 + -0.5 2,393,685 + -0.5 2,393,775 + +0.5 2,393,783 - +0.5 2,393,783 - +0.5 2,394,067 - +0.5 2,394,180 + -0.5 2,394,188 - +0.5 2,394,200 - -1.1 2,394,277 - +0.5 2,394,312 + Dsui_2246 0.59 -0.5 2,394,438 - -1.5 2,394,628 - -1.1 2,394,993 - Dsui_2247 0.72 -1.8 2,395,084 - +0.5 2,395,194 + +0.5
Or see this region's nucleotide sequence